bsg


Basic Information

Item Value
gene id bsg
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 14462650 ~ 14480454 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240127.3
GTGCACGTCAGGATCAAATAGAGGACGCCGGAGCTGCGCCTCAGTCCGAGCCGAGCTTTTAACGGAGCGGATCAGGAGTCTAAACCTCGGTGAAGTGCTGTCAGTGATAAAcccacagagagacagagatgatGCGGCTGCTGGTGCTCAgcgggctgctgctgctctgtgtgGACCAGGCGTTTCTGCGGACAGCCAGCTTCATAAAGTCTCCTATGTCTCAAATGAAGTTAATAGAGGACAGTGCTGAGCTGCACTGTGAGGTTATAGGGAACCCCATCCCCGAGGTGCAGTGGTGGTTTCTAGAGGGCGAGGAACCAGACGAGACGGTGTCTCAGCTTTTCGACGGGGCTCGGGATGAACACGTCCACATCAACACTACCTACGTTCACCACGCTGCCAGCACCCTCGCTCTCTTCAATCTCACACTAAACGACACGGGCGTGTACGAGTGCCGCGCCTCCAATGATCCCGACCGAAATGACCTGAGGACGACACCCAAAGTCAAGTGGATCCGCTCGCAAGCAAATGTTATTGTGTTCGAAAAGGCTCAGATTGTACCTACACCAGCTGAAGTAGTCAACCAGACTTCAGCTACACTTAGCTGCAACCTCACCAACCCATCGTCTCCTATCAAGGGACACTACTGGACAAGGAATGGCAAGGTGATCGAGGAATCAAAGATGGAGATTCCAAGCCTCTACACAGAGCACACCATTAATAAAATTGATTACCATGTTTCCGGAAAGTATACCTGCGTCTTCATGTCTGAGCCAGAAGCTAAGCATGACATTGAAGTCATGGTTCCTCCCCACGTTTCGCCCTACAAGCAATCTGAGAACAGTAATGAGAAGGATAAAGCTGCTCTGGTGTGTGTGAATCATGGCTACCCTTACATCAAAGACTGGGAATGGTACAAGCTTGAGGAGTCCAACGGGAGGAGGCTGATTGTTTCTGGTGTCAATGGCACTGGAAAGTATGTAGTCAAGAACACGGATCACAATTCCACACTTACCATCGATGACCTTGACATCAATGGTGACATGGGTACCTATGAGTGTCTTGGAAAGAACGACCTTGGTGAAAATTCGGGCAAGGTCAACTTGCGTGTGCGCAGTCGCCTGGCAGCCCTCTGGCCCTTCCTTGGCATTGTTGCTGAGGTCATCATCCTTGTCACCATCATCTTCATCTACGAGAAGAGGAGAAAGCCTGATGAGATTAACGACGATGATGACTCAGGATCCGCCCCACTGAAGAGCAATTCTGCTACAAACCACAAAGACAAGAATGTCAGGCAAAGGAACTCCAACTGAGAGGGCAGCAGGTGTCCAGATGACTACTGATAAAGATGAGAAAAGCGCAACATCACTGAAGAGCACGTTCTTCAGTGCACctgcagtttctgaataatcttcttctacttcttcttctttgctTGAGTGTAAATGTGTTGAGATATTGATTGGTCTCTTCTTTTCCCAgtatttctctctgtgtgttataGGGGTTgtagggagggaggggggagaAATTGCATGATTGTGTTCTTGCTGTAGAAGTGTGTTTTTAGTGAAACCCTTTCAATGTGGGAATTAACAATTGGTGATTTCTTTCGTGTTGGCTTCCTCCACTGTACCCCAGAACCCACGCTACCAAACTGTTTGTGTGGTCTCAGCCGCGTCCAGCTCTCTGATAGTCGATAAAATCGGGAGAGTGGGCGGTTCTTTTGGGATGGTGTGGATATTAAGTTGAGTTTCAGCATTTCACATTTACCTTCATCAGAACTGTCTGGATGCATGTTAAACCCTGAAGAACGGTTTGGTACTGTGGGTTCGGCATCTTTTCTAAGACATTTGAAAAACATCTATAATATATTCACTTTTTGGCAGCATGGGATTTTCAGATGTTCAGATAATCTTGATGTATTAGCTGCAGTGAGcagttactattattattgattgattactaatttttcaggctgtttttttAGTAGTCAGACGACTCCTAATGTCATTAGTTCACATGACCATCTCacgtgatctttttttttttttcctgtaagccttaatgttaatattcaccGTTTTTGCTTAAGTTGTTATAGTTGTAGAGacactaaattaataattatctaTAAATGcagtgcagacacacacacaaacacccatacacacacacaccatgccaATTTTGCAGCATATTGCACTGTTCAAATTAGGACTGCCTATTGTTtaccatgttcattttattttttattgttctgtttttttttttgttttttgtttttttggtttttgtcAGACATGCTGAAGTCTAGTCGTCCTGTAAGTCGTCCAGTGCAGTCTAAGACTAGACTCAGACTGTAAGTGAACAACCCGTCGTAACTCTTCTGGTGAAAggctttttaaggtttttagcATCATTTTAAGAATCCATTTTTGAGGACCAATATAAAGTGTGTGCCACATGCCATTTGATACCAACTCCAAACCTTTCCAGTACTGAATAGAGAACCTTCTGATGATCTGTATCTTGATTACGGAGTACAGGTAACATTTTTAGTGGAAGTTTTTGTCCTGTGTATTCAATTCTCTTGTAAGCAGTTCAGAAGCCATACTCTCTCCAGTCTGGGTTAGTGATGTGACTGAATGTGTGCCATTTCTCTGTTAGGGGCATGTTGAATATTAACAACCTGTTAGAACTGTATAAAGTAATTTGCCTCGGCAGCGTTGGACATCTGAACTGCTGTCGACTGTACTGACCCGCACACTATTAATAAAGTTATTGGGTTTGATTTTAACTGCA
>XM_015603327.2
CGTTCTCGTGCACGTCAGGATCAAATAGAGGACGCCGGAGCTGCGCCTCAGTCCGAGCCGAGCTTTTAACGGAGCGGATCAGGAGTCTAAACCTCGGTGAAGTGCTGTCAGTGATAAAcccacagagagacagagatgatGCGGCTGCTGGTGCTCAgcgggctgctgctgctctgtgtgGACCAGGCGTTTCTGCGGACAGAGGCTCAGATTGTACCTACACCAGCTGAAGTAGTCAACCAGACTTCAGCTACACTTAGCTGCAACCTCACCAACCCATCGTCTCCTATCAAGGGACACTACTGGACAAGGAATGGCAAGGTGATCGAGGAATCAAAGATGGAGATTCCAAGCCTCTACACAGAGCACACCATTAATAAAATTGATTACCATGTTTCCGGAAAGTATACCTGCGTCTTCATGTCTGAGCCAGAAGCTAAGCATGACATTGAAGTCATGGTTCCTCCCCACGTTTCGCCCTACAAGCAATCTGAGAACAGTAATGAGAAGGATAAAGCTGCTCTGGTGTGTGTGAATCATGGCTACCCTTACATCAAAGACTGGGAATGGTACAAGCTTGAGGAGTCCAACGGGAGGAGGCTGATTGTTTCTGGTGTCAATGGCACTGGAAAGTATGTAGTCAAGAACACGGATCACAATTCCACACTTACCATCGATGACCTTGACATCAATGGTGACATGGGTACCTATGAGTGTCTTGGAAAGAACGACCTTGGTGAAAATTCGGGCAAGGTCAACTTGCGTGTGCGCAGTCGCCTGGCAGCCCTCTGGCCCTTCCTTGGCATTGTTGCTGAGGTCATCATCCTTGTCACCATCATCTTCATCTACGAGAAGAGGAGAAAGCCTGATGAGATTAACGACGATGATGACTCAGGATCCGCCCCACTGAAGAGCAATTCTGCTACAAACCACAAAGACAAGAATGTCAGGCAAAGGAACTCCAACTGAGAGGGCAGCAGGTGTCCAGATGACTACTGATAAAGATGAGAAAAGCGCAACATCACTGAAGAGCACGTTCTTCAGTGCACctgcagtttctgaataatcttcttctacttcttcttctttgctTGAGTGTAAATGTGTTGAGATATTGATTGGTCTCTTCTTTTCCCAgtatttctctctgtgtgttataGGGGTTgtagggagggaggggggagaAATTGCATGATTGTGTTCTTGCTGTAGAAGTGTGTTTTTAGTGAAACCCTTTCAATGTGGGAATTAACAATTGGTGATTTCTTTCGTGTTGGCTTCCTCCACTGTACCCCAGAACCCACGCTACCAAACTGTTTGTGTGGTCTCAGCCGCGTCCAGCTCTCTGATAGTCGATAAAATCGGGAGAGTGGGCGGTTCTTTTGGGATGGTGTGGATATTAAGTTGAGTTTCAGCATTTCACATTTACCTTCATCAGAACTGTCTGGATGCATGTTAAACCCTGAAGAACGGTTTGGTACTGTGGGTTCGGCATCTTTTCTAAGACATTTGAAAAACATCTATAATATATTCACTTTTTGGCAGCATGGGATTTTCAGATGTTCAGATAATCTTGATGTATTAGCTGCAGTGAGcagttactattattattgattgattactaatttttcaggctgtttttttAGTAGTCAGACGACTCCTAATGTCATTAGTTCACATGACCATCTCacgtgatctttttttttttttcctgtaagccttaatgttaatattcaccGTTTTTGCTTAAGTTGTTATAGTTGTAGAGacactaaattaataattatctaTAAATGcagtgcagacacacacacaaacacccatacacacacacaccatgccaATTTTGCAGCATATTGCACTGTTCAAATTAGGACTGCCTATTGTTtaccatgttcattttattttttattgttctgtttttttttttgttttttgtttttttggtttttgtcAGACATGCTGAAGTCTAGTCGTCCTGTAAGTCGTCCAGTGCAGTCTAAGACTAGACTCAGACTGTAAGTGAACAACCCGTCGTAACTCTTCTGGTGAAAggctttttaaggtttttagcATCATTTTAAGAATCCATTTTTGAGGACCAATATAAAGTGTGTGCCACATGCCATTTGATACCAACTCCAAACCTTTCCAGTACTGAATAGAGAACCTTCTGATGATCTGTATCTTGATTACGGAGTACAGGTAACATTTTTAGTGGAAGTTTTTGTCCTGTGTATTCAATTCTCTTGTAAGCAGTTCAGAAGCCATACTCTCTCCAGTCTGGGTTAGTGATGTGACTGAATGTGTGCCATTTCTCTGTTAGGGGCATGTTGAATATTAACAACCTGTTAGAACTGTATAAAGTAATTTGCCTCGGCAGCGTTGGACATCTGAACTGCTGTCGACTGTACTGACCCGCACACTATTAATAAAGTTATTGGGTTTGATTTTAACTGCA
>XM_022669685.1
CCTGGTGTTGGTGATATGTTCCTGATGGGTACACATGTAGCCAGCTTCATAAAGTCTCCTATGTCTCAAATGAAGTTAATAGAGGACAGTGCTGAGCTGCACTGTGAGGTTATAGGGAACCCCATCCCCGAGGTGCAGTGGTGGTTTCTAGAGGGCGAGGAACCAGACGAGACGGTGTCTCAGCTTTTCGACGGGGCTCGGGATGAACACGTCCACATCAACACTACCTACGTTCACCACGCTGCCAGCACCCTCGCTCTCTTCAATCTCACACTAAACGACACGGGCGTGTACGAGTGCCGCGCCTCCAATGATCCCGACCGAAATGACCTGAGGACGACACCCAAAGTCAAGTGGATCCGCTCGCAAGCAAATGTTATTGTGTTCGAAAAGGCTCAGATTGTACCTACACCAGCTGAAGTAGTCAACCAGACTTCAGCTACACTTAGCTGCAACCTCACCAACCCATCGTCTCCTATCAAGGGACACTACTGGACAAGGAATGGCAAGGTGATCGAGGAATCAAAGATGGAGATTCCAAGCCTCTACACAGAGCACACCATTAATAAAATTGATTACCATGTTTCCGGAAAGTATACCTGCGTCTTCATGTCTGAGCCAGAAGCTAAGCATGACATTGAAGTCATGGTTCCTCCCCACGTTTCGCCCTACAAGCAATCTGAGAACAGTAATGAGAAGGATAAAGCTGCTCTGGTGTGTGTGAATCATGGCTACCCTTACATCAAAGACTGGGAATGGTACAAGCTTGAGGAGTCCAACGGGAGGAGGCTGATTGTTTCTGGTGTCAATGGCACTGGAAAGTATGTAGTCAAGAACACGGATCACAATTCCACACTTACCATCGATGACCTTGACATCAATGGTGACATGGGTACCTATGAGTGTCTTGGAAAGAACGACCTTGGTGAAAATTCGGGCAAGGTCAACTTGCGTGTGCGCAGTCGCCTGGCAGCCCTCTGGCCCTTCCTTGGCATTGTTGCTGAGGTCATCATCCTTGTCACCATCATCTTCATCTACGAGAAGAGGAGAAAGCCTGATGAGATTAACGACGGATCCGCCCCACTGAAGAGCAATTCTGCTACAAACCACAAAGACAAGAATGTCAGGCAAAGGAACTCCAACTGAGAGGGCAGCAGGTGTCCAGATGACTACTGATAAAGATGAGAAAAGCGCAACATCACTGAAGAGCACGTTCTTCAGTGCACctgcagtttctgaataatcttcttctacttcttcttctttgctTGAGTGTAAATGTGTTGAGATATTGATTGGTCTCTTCTTTTCCCAgtatttctctctgtgtgttataGGGGTTgtagggagggaggggggagaAATTGCATGATTGTGTTCTTGCTGTAGAAGTGTGTTTTTAGTGAAACCCTTTCAATGTGGGAATTAACAATTGGTGATTTCTTTCGTGTTGGCTTCCTCCACTGTACCCCAGAACCCACGCTACCAAACTGTTTGTGTGGTCTCAGCCGCGTCCAGCTCTCTGATAGTCGATAAAATCGGGAGAGTGGGCGGTTCTTTTGGGATGGTGTGGATATTAAGTTGAGTTTCAGCATTTCACATTTACCTTCATCAGAACTGTCTGGATGCATGTTAAACCCTGAAGAACGGTTTGGTACTGTGGGTTCGGCATCTTTTCTAAGACATTTGAAAAACATCTATAATATATTCACTTTTTGGCAGCATGGGATTTTCAGATGTTCAGATAATCTTGATGTATTAGCTGCAGTGAGcagttactattattattgattgattactaatttttcaggctgtttttttAGTAGTCAGACGACTCCTAATGTCATTAGTTCACATGACCATCTCacgtgatctttttttttttttcctgtaagccttaatgttaatattcaccGTTTTTGCTTAAGTTGTTATAGTTGTAGAGacactaaattaataattatctaTAAATGcagtgcagacacacacacaaacacccatacacacacacaccatgccaATTTTGCAGCATATTGCACTGTTCAAATTAGGACTGCCTATTGTTtaccatgttcattttattttttattgttctgtttttttttttgttttttgtttttttggtttttgtcAGACATGCTGAAGTCTAGTCGTCCTGTAAGTCGTCCAGTGCAGTCTAAGACTAGACTCAGACTGTAAGTGAACAACCCGTCGTAACTCTTCTGGTGAAAggctttttaaggtttttagcATCATTTTAAGAATCCATTTTTGAGGACCAATATAAAGTGTGTGCCACATGCCATTTGATACCAACTCCAAACCTTTCCAGTACTGAATAGAGAACCTTCTGATGATCTGTATCTTGATTACGGAGTACAGGTAACATTTTTAGTGGAAGTTTTTGTCCTGTGTATTCAATTCTCTTGTAAGCAGTTCAGAAGCCATACTCTCTCCAGTCTGGGTTAGTGATGTGACTGAATGTGTGCCATTTCTCTGTTAGGGGCATGTTGAATATTAACAACCTGTTAGAACTGTATAAAGTAATTTGCCTCGGCAGCGTTGGACATCTGAACTGCTGTCGACTGTACTGACCCGCACACTATTAATAAAGTTATTGGGTTTGATTTTAACTGCA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG:

id description
K06535 BSG, CD147; basigin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240127.3 True 2805 mRNA 0.44 9 14462657 14480454
XM_015603327.2 False 2461 mRNA 0.43 8 14462650 14480454
XM_022669685.1 False 2638 mRNA 0.43 8 14469337 14480454

Neighbor

gene id symbol gene type direction distance location
LOC103041829 NA coding upstream 50615 14359209 ~ 14412035 (+)
LOC103042131 LOC108424984 coding upstream 117470 14334095 ~ 14345180 (+)
LOC103040508 LOC108414270 coding upstream 129611 14312498 ~ 14333039 (+)
mrpl54 mrpl54,LOC102788358 coding upstream 153019 14306723 ~ 14309631 (+)
zbtb37 zbtb37,LOC107592717,LOC107669813,LOC107715094,LOC107588062,LOC107757485 coding upstream 464225 13989840 ~ 13998425 (+)
LOC103044493 hcn2,LOC108429559,LOC107569045,LOC107569931,LOC107719599,LOC107655221 coding downstream 3487 14483941 ~ 14534170 (+)
LOC103026177 fgf22,LOC106613753,LOC106584266 coding downstream 141724 14622178 ~ 14660025 (+)
LOC103026778 NA coding downstream 230920 14711374 ~ 14725957 (+)
LOC103045821 plak,LOC108438667,LOC108270763,LOC107562072,LOC107680531,LOC107753847 coding downstream 353770 14834224 ~ 14868739 (+)
LOC103022023 NA coding downstream 491807 14972261 ~ 14994616 (+)
G42521 NA non-coding upstream 48904 14412289 ~ 14413746 (+)
G42527 NA non-coding upstream 84620 14377478 ~ 14378030 (+)
G42496 fam32a,LOC107757479 non-coding upstream 155709 14303418 ~ 14306941 (+)
G42469 NA non-coding upstream 301939 14160405 ~ 14160711 (+)
G42446 NA non-coding upstream 316293 14086909 ~ 14146357 (+)
LOC111192557 NA non-coding downstream 57867 14538321 ~ 14560369 (+)
G42564 NA non-coding downstream 147403 14627857 ~ 14669283 (+)
G42571 LOC103031381 non-coding downstream 204845 14685299 ~ 14688753 (+)
G42583 NA non-coding downstream 248006 14728460 ~ 14733285 (+)
G42579 NA non-coding downstream 260820 14741274 ~ 14749183 (+)
eps15l1 eps15l1 other upstream 328104 14070423 ~ 14134546 (+)
LOC103037142 LOC108429501 other upstream 605289 13810833 ~ 13857361 (+)
LOC103034435 NA other upstream 840608 13617083 ~ 13622042 (+)
LOC103032215 NA other upstream 940393 13509020 ~ 13522257 (+)
G42208 ier5 other upstream 1012173 13448592 ~ 13450477 (+)
G42605 NA other downstream 414608 14895062 ~ 14899248 (+)
LOC103036127 cunh19orf24 other downstream 1498032 15978486 ~ 15984632 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other downstream 1960477 16440931 ~ 16446287 (+)
LOC103044285 NA other downstream 2336147 16816601 ~ 16819251 (+)
LOC111192574 NA other downstream 2467926 16948380 ~ 16950360 (+)

Expression


Co-expression Network