LOC103022023


Basic Information

Item Value
gene id LOC103022023
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 14972261 ~ 14994616 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240145.3
gagagagggagagagagtgtgtatgtgcgaGAGTGAGCGAGTGACAGGGGCTTTGCAGAGGAGCCACAGATCAAACGAGGAACGAGGCACACGAGAGAAGGAAAGACTTGCATTCTCTCCACTCCATTCGTCCACACCTCCCCTGCTTCTTATTCCTtgtccctcacacacacagacatacttGGCTCTCGCTTTCTTCTCAGCACCCCTGTTGTCACGCCAGCACTAGACCCGCAGGCTGCGTAATCTCTGGCTGGCTCAAGCTCTCAGAGAGTCACAGTGGGCTTGTCGCTGTGGGAAACTCATTGATTCTCACAGTGCTAAAAGGGACAGCTGGCTAATCAACAATGCTTCTTTCGCTGATTTACATCCATGGCAGTGGGACACTCGAGCGTGCAAGGGAGACCCACTGACATCGGCCACAACCCCTTCTGCCACCTGCTGCAACCTTGGGAAGCACTAGGGAAGCGCAATCCCAGAAGAAATAAGTCCTGGACACAGAAGTTCCTGGTCCCTCGAAGCTGGTCAAGATGGTTTCCACAGGTGGTTTATCTTGAGTAAAAGCTCTAGGAGATGTGGAGTTCCAGGAACATGGGCTTTCAAGTCACCTTGCTGCTGTTGCCTTTTCTTCTGCCCCCCTTGGTGTCTGCTCAGCTCCGGTCCAGCTCAGACTCTGATGGACTAGATGCCACCTCATCCCTCTCTTACTCAAGTTCCACAGCAGAAGAGGAGCTGGCCAGCATGCAGATGACAAGCGTAGGCCCAAGCCCAAAGGTAGTGATGAAGGAGGTGGACGCAGAAAAAGAAGACGAAGGAGATAAAGGCGAGGAGAAGGAAGAGGAGGACTCGTCCATGCCTGAGAATTACCTCTACACCGGCGATGCCTCTGCCCTCAGTTCTACCAGATGTCGCCGGCCCTTCCAGCTGTCCCCCCAGCGTGGCACTTTCCCGCCGGACCTGAGGCCTCTCTTGCGGCAGGCTGCTGTGTCCCTCACCAATGCTGCCAACTTCCTCAACCTCATCTTCCAGGCCAGTGAGCTGCGGGAGACCAGTGTGCGGGAGGACATTGAGTGGTACCATGCACTGGTGCGGGGCATGCTGGAGGGCGACAGGCCTGGCCTAGTCCGAAGGGCCTTGCTGACTTTTGATGCCGATCCTACGGCACCGCAACCACAGCTGGTGCTCCGCGCCTCTAGGGGCCCTTCGCAAGACATCTACCTGCAGGACCTCACTTTGACCTGGGAGAGCCTTATCTCTCCCCCCTCTGGTCACAGCTGGTTCACCTCGCTGAAGTCCAGCATGCCACCCCTCCCTGGCCTGTCAAAACGGGTCCTGCTCAATGACCTCAGCACCCTGGACACACCCAAGTGGGCACGTGGGGATAGCTACATCACCAATAGCAGTGGACTTCGGTGGGGTGAGACGCCTTTCTTGGAGTGCGAGGACGGTCGTTACTTGCCTGGATGGCTCCTTACCCTGTCAATACCCTTTTATGGGCTGAAGCCGGACCTCAGCCCAGAGTTCAGGGGGGTGGTCCGTGTGGATGTGAATATTCAGGGTTTTGATGTGGACCAGTGTGCCAGCGGAAATGTGTGGTTTTCAGACACACATCAATGTAACCGGACCAGCATGGAGTGTGACCCAATTCCAAGGCAGGGCTTTCGACTGGGCCAGTACTGCTGCCGCTGTAAAGAGGGATACTACAGCCCACCATCAAATTACAAGAACAAAATGGCTGATGGTTCGAATAGTACCCGGACTTGTTACCCTAACCTGCCAGTTTGCCTACCCTGCTGGCCTGGCTGTAAGCAGTGCAAGGACAGTTCCCCCTGTTGGGTGCAGGAAGACTGGCTCCTGCGAGCAGCGGTCCTGGCTGTGCAGGGTATCTTCATGGCTCTTGTTCTTCTCAGCATGTTGAGGGCATACCAGTGTCGCAGGACCAAGCGGATCCGAGCCTCAGGCCTGATGCTGCTGGAGATGATTCTGTTTGGGTCTCTGCTCCTTTACTTCCCGGTCTTCATCTTGTATTTCAAACCCAGTACTTTCCGCTGCATCCTACTCCGCTGGGTCCGTCTGCTTGGCTTTGCCATCGTTTATGGAACTTTGACACTGAAAATGTATCGGGTGCTGAAGGTATTCCTTTCACGTACTGCCCAGAGAGTCCCCTACATGTCTAGTACTACTGCAATGAAGATGCTGGGAGTGATGGTTCTCACTGTGAGCTGGTTTTTGTGTGCATGGACTGCGGGGGTCCTACAAAACCGAGATCGCAATGTGCCTGTACTGATTACATCGACCACTTCAGATGGACAAGGCTTCAGTGTGTGTGACCTGGACCGGTGGGATCATATGATGGCTGTGGCGGAGTTATTGTTCTTGTGCTGGGGGAGCTTCCTCTGCAATGCAGTGAAGGCTGTTCCCTCTGCCTTCCATGAGCCTCGCTACATGGGCATTGCCATCCACAATGAGCTGCTCCTCTCCGCCATGTTTCATCTTTTTAGATTTGCAAGGCCATCTCTTCATCCTGACTGGATGCTCCTGTTGTTCTTCACCCATACTCATGTCACAATCACTGTAACCCTTGGTCTGCTGTTCCTTCCTAAGTTCCTTTACATATCTCGACCTGTCAAAGAAGAGGTTGCTGCAGAGGTTTATGAGGATGAGGTGGACCTACGACGTTCATGCTCTTATCTCAACAGTAGCTTTACATCTACCTGCTGGAGCGACCACAGCCTGGACCCTGATGACATCCGGGACGAGCTGAAGAAACTTTATGCGCAGTTGGAAGTCCACAAGACCAAAAAGATGGCGAACAACAACCCACACCTGCAGAAGAAGCGCAGCTCTCGGCTTACGCTTGGACGATCCCTTATTAAGCGCATAGCGGAGATCCCAGAGAGCCTGAGTCGCCAGTGCAGTCGTGAGGAGAAGGACATGTCAGGGATTGGAGGAATGCGAAAGTGGTCTGGAGCTTTCATGTCAACTCCTGACAGCGCTAGTATAAAGAATGAGACAGTAAAGCTACCGTCTCCAAAGATGCGAAAGTCTCTTAGTGCCTATGAGTATTACCCAGAGAAGGACAGCTCCCGGAAATCCTCGATGAGAAACTCCATTGATAAGAGGTCATCGCATATCTCAGAGGCGGAATCTATTGACACAGCATTACTTATTTGTAAGTCAGCCAGCGCTCACAATCTTGCTGTAGACAATAACCTTCTTCAGCCTGTCTCTACCCGGTTTCAGAAGTCTCTTAGTTTCACCGAAAAGCACAGAGATCATTATCCTCTTTGCCCTACTAGAAGCATGGAGGATGCGTCACTTGCTGCCAAAACAAGTCCTGTACAGAAGGTTCAACGACCACAGGGCTCTATCAAAGAGCAAACCTCAAATGCCTTGCTTTGTCTGTCGTTCGACAAGTCTGAGGTCTGCCCTTGGGAGGTTGAAGAGGAACAGCCTGCAGGCAAAAACCTGTCGAACCAAAAGCACGtcacttattctctctctcaggaaCAGCCCCCAACACCTGAGACCGCATCATCACCTACCCGACTCTTTGTCTGTCCCTGGGAAGGTTtgcctccccctcctcctccagcagcagaagGAGGGCTTGTGGCAGATGCAGATGTTGACTCTCCAAGGCCAAAACCTCCCATCTCCTCTAGTGCTCCAGGATCACCACATGGCTTTGCCAAGCCAAAGGACCACCGTGGTTTCTCCTTCCGCTCTGCCACTCAAAGCCTCCTTGTGGTAAGAGGCTTGGGAAAAGGGAGTGGCAAAGATAAAAGTAAAAGCGACACTAACAGTAAAGACGACACATCCCAACAGACCCGAGCCACATCAATGAAACTGACCCCAGGCACTGCTGCGACTTCAGGGAGAAGGACACCACAAACACCAAGACGAGCTATGACCACTGTTGAAACAAAACCTTGCCTTGTGAAACAGGAAGCAGTAAGACTATCATCATATGATTCCCCAGAAAGAAGCCCAAAAGGCAGTGCTCTAACTCAAATCTGCCCATGGGAATCAAAGGAGATAGTAATGGAGGTCAAAAAACTAAATCCCTATGAAGgtataatacaaaaacaaggcAGCAAACATAGACTGTCACTGACCCTCAGCACTGACAGCAACAAATCATCTTTGCTCCATGTTAGACCTTCACTGACTGTTCCAAAGGCAGACGTATGTCCATGGGATGTTCCAACCAAGCCTCAGCTAGTACATCAACAAAGCAGCATTGCTAATATTTGCCCCTGGGAAGTGGAGGAATCAGATCAATTACAAGCCAAGGAAGCACGTGATGATATTTGTCCTTGGGAAACAGATGACCAAGAACCACAAatgacaaaagagaaaaaagacttATTAAATATTTGTCCTTGGGAGACCTCAGAAGTGGTGTCTAGTACTGACCATAAATCTATGGAAGGATTTGAACAACGGCGAAGCAGTATAAAGCCTGACGTGTGTCCTTGGGATGTGTCAGATACCAGTACCCCTCAGGTTAAACAAGATCCTGCCAAACCAACTTCTGAAGTAATAAAGCCAACAGAGAGAGTCATATATGTAAATACCCATCCAAACGAGAGCCCCTTAAATAAGAAGGGTCCAGGTGAACAAGAGAAAATTAGCAGTGATGTGTGTCCATGGGAAACAAGTGAAGCACAGATGCAACAAGAAGATGCCCGTGCTAATGTGTGTCCCTGGGAATCAGGGCAGGACAAGGGCCCTGAAACAACCAAGGGAACCGACTCAGACAGTAGAACTAAAACACGTCTGTTAACTAAACAGCTCACCAGTAATGCGGAAGCATGTCCATGGGACTACTCAGAGTCTTCTCAACCAGACGTCAAAGGGCCTGAAAGTCAAGAAAGGGTACATTCTAACATATGCCCATGGGAATCGGAACAGACACCAAAAACCGATGCTAAAGAACAGTCACAAGAAGCTGCCCCAGTCAAGAAAAATCTTCTGACTAAACAGATGACAAACACAGCAGAAACATGTCCTTGGGATTTCCCTGAAGCCACACCTACAGTAACAAAATCAGAGGGAGCATCTTCTAATCCAAATAAAGAAACAGCTGAGGTAACATCACAGAGTTCTGCCACAAAGAATGCAAATGTATGTCCATGGGAGGCAGAGCAGTCTGAGCGAACAGAAGGAAAAGGCAGTATCAAAACCAAGGAGCGAGAGAAATCTCTCCTGAAACAagacagtaaacatgcagatgTTTGTCCATGGGAAACTAGTGAGCCAGTCAGAAAGCAGGAGGTTGCTTCTTCAGAGGTCTGTCCTTGGGAAACTGATGGACCAGTCAGAAAACAAGAGGCTGGTTCTTCAGAGGTCTGTCCCTGGGAAACTGGTGAGCCAGTCAGAAAGCAAGAGGCTGGTTCTTCAGAGGTCTGTCCCTGGGAAACTGGTGAACCAGTCAGAAAACAAGAGGCTGGTTCTTCAGAGGTCTGTCCCTGGGAAATTGGTGAGCCAGTCAGAAAGCAAGAGGTTGGTTCTTCAGACATCTGTTCTTGGGAAACTGGGAAGCCGGACACTGAACAGCCAGTAAAATCTTACCAAAAACAAGCAAGTCTTCATTCGAGGCAGTCAAGTGAGCGAGAAAAGCCAGTTCAAAAGCAAGAAAGCATTTGTGCTGATATTCGCCCCTGGGACACAGAGCAATCACCTAAACTAACTAGTAGTCAAGATAAGTCTCAAGCAGATATATATCCTCAAAAACATGAAGACTCAGAAATATCAAAAATGCAAGAAGGTGCCTGTGCAGATGATGCCTCTGCAATTCCAGGGTATGAAGAAGTCAGTGGTGATCAATGTGTCACTCAAATCATTCAAACAGATGCGCCACTGTCTGCAGGTAGCGCACATACTCCACAAGGGTCTAGAGGTACTCGACCTCTGACCCGATGTGATGCTCTGTGTCCATGGGAAATCGAGGGAGAACCACAAGCATCCATAATAGAGCATGATAACAACTCAGATGTTTTTACATGGGAGGAACCAATACCAGAGGAGGAAGAAGGTGATGCAGAAACTGCTGCTGAGGCCTTTATTTTCCCACCTGACTTATAAACTGTTTAGCACTGTGCTTTGATCTTCGAGgacataaaacaacaaattgACAAATGTTACAAACTGAGCCACCAGGCATACAGTACAATGTATTCCTGGCACCTTGCGAAATGCAGTGGCTACCATTGAGGAAGACTGCTATAGTGAATATGGCATAGTACTTCTCAAATGTCTGCTCGTTAAGAAAATGCAAAGACTGAAAACCATGGTGTTAAATTGGTGCCCCCATCTAAGTGCACATTCCTCTTTGGTCCTAAATTATTATCAGTCCCTGTTTGAGCTTGTTATCgttttgtgtgtctttgtgtttgtATGCCAGTTCAGTTTCTTTAATCATGAGTCACACGTCTGCATCACCTTCAGATCTGAGAGAATACCTGGTCTAACGAGAGAAATACCAGTCAAGAACAAGAGCATGTATATGGTTgtcagaatatttttattacacttCAGATTTCTCTTGTAGTGGAATTTCATTAGGTGAGAACATTAATTCTGCATCTGCTCAATGAATGCACTTGTTTTCTGTGATATATACCCAGCTCTGAAACATGCACCGCGTTCATGAACAAAACAACTGCCATGGCAGTGATGCATGTGAAACAGTGTTCAGGAAATGTTCAGTACCACCTGTGACTACCATAAGCTATTTCTAAAGATGTTTTGTTTACATTCAATttgatatataaatgtatacatttattaaaagaattgttttgtttacaaatgctgtaaatataaacaaactATTTTGAACTTTCAAA

Function

GO: NA

KEGG:

id description
K22961 GPR179; G protein-coupled receptor 179

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240145.3 True 6854 mRNA 0.49 12 14972261 14994616

Neighbor

gene id symbol gene type direction distance location
LOC103045821 plak,LOC108438667,LOC108270763,LOC107562072,LOC107680531,LOC107753847 coding upstream 103522 14834224 ~ 14868739 (+)
LOC103026778 NA coding upstream 246304 14711374 ~ 14725957 (+)
LOC103026177 fgf22,LOC106613753,LOC106584266 coding upstream 312236 14622178 ~ 14660025 (+)
LOC103044493 hcn2,LOC108429559,LOC107569045,LOC107569931,LOC107719599,LOC107655221 coding upstream 438091 14483941 ~ 14534170 (+)
bsg NA coding upstream 491807 14462650 ~ 14480454 (+)
LOC103023991 rbbp7,rbb4l,LOC103023991,LOC108438657,LOC105893332 coding downstream 50658 15045274 ~ 15051775 (+)
rtel1 rtel1,LOC107579445 coding downstream 68011 15062627 ~ 15089931 (+)
zgpat zgpat coding downstream 96755 15091371 ~ 15097213 (+)
ptgfr ptgfr coding downstream 136361 15130977 ~ 15136409 (+)
LOC103026176 bt3l4,btf3l4,LOC103026176,LOC105028135,LOC107562065 coding downstream 143648 15138264 ~ 15141396 (+)
G42626 NA non-coding upstream 5391 14966150 ~ 14966870 (+)
G42604 NA non-coding upstream 68327 14890941 ~ 14903934 (+)
G42600 NA non-coding upstream 91184 14879019 ~ 14881077 (+)
G42599 cdc6,LOC107753851,LOC107718871,LOC102777898 non-coding upstream 94901 14870356 ~ 14877360 (+)
G42590 NA non-coding upstream 203547 14765706 ~ 14768714 (+)
G42632 NA non-coding downstream 5819 15000435 ~ 15002096 (+)
G42633 NA non-coding downstream 15864 15010480 ~ 15010974 (+)
G42636 npepps,LOC107098842,LOC102793525 non-coding downstream 20327 15014943 ~ 15019535 (+)
G42637 txlng non-coding downstream 23184 15017800 ~ 15054880 (+)
G42647 txlng,LOC107665847 non-coding downstream 62599 15057215 ~ 15057675 (+)
G42605 NA other upstream 73013 14895062 ~ 14899248 (+)
eps15l1 eps15l1 other upstream 837715 14070423 ~ 14134546 (+)
LOC103037142 LOC108429501 other upstream 1114900 13810833 ~ 13857361 (+)
LOC103034435 NA other upstream 1350219 13617083 ~ 13622042 (+)
LOC103032215 NA other upstream 1450004 13509020 ~ 13522257 (+)
LOC103036127 cunh19orf24 other downstream 983870 15978486 ~ 15984632 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other downstream 1446315 16440931 ~ 16446287 (+)
LOC103044285 NA other downstream 1821985 16816601 ~ 16819251 (+)
LOC111192574 NA other downstream 1953764 16948380 ~ 16950360 (+)
dda1 dda1,LOC105913185,LOC107685208,LOC105012003 other downstream 2017851 17012467 ~ 17017856 (+)

Expression


Co-expression Network