plppr3 (plppr3,LOC107753813,LOC107593129,LOC107602805,LOC107656087,LOC107723853)


Basic Information

Item Value
gene id plppr3
gene name plppr3,LOC107753813,LOC107593129,LOC107602805,LOC107656087,LOC107723853
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 15828368 ~ 15851254 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240185.3
ttttctctcgctcGCCGCCCACACACTTCACGTTTTctcccctcacacactctcagcaCCACCGCTGTCCGTCCGTCCTCCGGCTCCTTCATTAGACAGACACCTACCTATACGGACAGtaactgtgtgagagagagagagggagtctcTGAGTGAGGAGGAGGAAAACACCCAGTCCGCCGAGCTTCGTGCTCGTTTGTGAAACGTGAGTAGAAAGAGGAATGAAAGCGCGGAGCTCCGCAGTGTAACccacaggaggaggaggaataggAGGACGGAGAACGGTTCTAGACACCTGCACAGAACCACGGAGGTTCTGCTGAGAGAACGAGACACTAATACTGTAGAATAGAGCCAGTTTTCTCCTCGACGgtctGTGTTTTTGGAGACGCCGTAATGATGCCCACACGAGACAAGATCAAGAAGAAGCCCCCCAAAGACAGCTTAACATTATTACCCTGCTTCTATTTTGTAGAGCTGCCCATCGTGGCCTCCTCGATGGTGTCCCTGTACTTCCTGGAGTTGACAGATGTGCTGCAGCCAGCACAGGTGGGCTTCCGCTGCCATGACCGGTCCCTCAGCATGCCGTATGTGGAGAGCGGAGAGGAGCTTATCCCCCTGCTGATGCTGCTCAGTCTGGCCTTCGCTGGTCCTGCTGCTTCCATCATGATTGGAGAAGGCATTGTGTACTGCATGCAGTCCAGACTCAAGATACGGCCTGGGAACGAGGGTAGTATCAACGCTGGCGGCTGTAACTTCAACTCCTTCCTGCGCAGGACTGTGAGATTTGTAGGTGTTCATGTGTTTGGTCTCTGTGCCACGGCGCTGGTCACTGATGTCATCCAAATTGCCACTGGCTACCACACGCCTTTCTTCCTGACTGTGTGCAAACCCAATTACACCTTCCCCGGAGTCTCCTGTGAGAAAAACCCTTACATTACTAAAGACATCTGCTCCGGCCAGGACCAGCACGCCATTCTCTCCGCCAGGAAAACCTTTCCCTCCCAGCATGCAACTCTTTCTTCCTTTGCTGCTGTTTATATTTCAATGTACTTCAACTCAACTATCTCAGACAGCACCAAGCTGCTGAAACCTGTGCTGGTGTTCGCCTTCGCTATCGCCGCTGCCTTAACAGGCCTTACACAGATCACTCAGTACCGCAGCCACCCCATCGACGTCTATGTGGGCTTCTGCATCGGCGCTGGCATCGCTGCGTACCTGGCGTTCCATGCTGTTGCTAACTTCAAACCAGCAGAAGACGCCATTCCCCTTCCTGCCCCTCCTCCAAAGGATGCCTTGCGAGTTCTGGCTCAACGAGGTCACGATTCCGTCTACAACAAAGGCCATCCCTCGGAGAGCAACGAGGAGATCACATCGCCCGCCTCTTTGGACGGACTCAACCGGCCCTTGCAGAGAGAGAAGGCTTCCTTGGGCAGCCTGAAGCGAGCAAGTGTGGACGTGGAGCTTCTAGCACCTCGCAGCCCGATGGGTAAAGAGACTATGGTGACCTTCAGCAACACTTTACCCAGGGCCACGGCTGGTCCTGAGGAACCTGTGCGACGTCTTGTGACGGTTCCTGTCCCTGTGCCTATGGACCCCATGCGCTCGCAACAGCTGGTCTCAGAGTGGAAGCAGAAGTCGATGGAGATGCGTAGTGCTAGCTTACAAAGTGAAGAGGGCAGCAAGGAGAGTTCAGAAGTGAGCGAAGACACTGGTGATGAAGAACGTGCACCATCTCCTATGTACAATACAGCTGTGCAACAGCAGCCTACCAGGCCAAGCAATCCGCCAGCTGGAGCAAAGGTGGTGATGCCTCCTAGGCCTCCTGCTCAGCCCTCCGTCCCTCCACCAGTGTCGCCCAAGAGTGCCAGTACCCGTGCCAAATGGCTCTCCATCACAGAGAAAACTGGTGCCAACGTTCCAGCTGCTCTCAGGTCAGGGAACCAACCTCGAATCATGCAGGTCATTGCCATGTCCAAGCAGCAGGGTCTCCTCTCAGGAACCCCCAAATCTTCAGAGGCCTCGTCCTCCTCTGCCGCGTCCTCCGTTACGGGAACCGAGTCGCCTCCCTACCGCCCTCCATCTGAACGAGACAGTAGTTCGGGGATTATCACTGTAGACGCCCATGCTCCCCACCACCCAGTCGTCCACATGGTGTCAAACCCCGTCAACCCCTGGGAGTGGAGGGGCACATCGAATGGGAACACGGGGGCTCCTGAGTCTTACGAACTGAACGACCTCAACCGTGAGGCTTCCAGGGGCTATCGTCAGGTAAAGAACAGCTCGCCATGCCCTTCCTACAGCGAGGTCGACCACGAGCCTCAACTTCCTCATCCTCCCCAACCTCCTCAACCTCCCCAGCTGCCTCACCTGGATCAAGCCATGGAAGCACGCAGCCTGCGGCGCAAAACCCCTTTGGTGCTCTTAGATCGGGAGAGCAGTCTGAGCCAGAGCGAGCACAGCGAGAACTTTTACAGAAAGCTGCAAAGTGGCCGACGCTTCAAAGACTGACGGGGCATCGAGCAGGACAACCAAACGCATGAACATGAAGATGCAGGGTGGACCAATCTCGCTATGCATCAGTCTTTCAGACTCTTTCAGtcattttgtatatttgattCGTTTTGAGGACTCGAGAGGGGAAAAACCTGAGCGGATCCATTAAGGAAGGCTGTATTCCGAGGCTCTGTTTTTGGGAATTGCTGCTTCCGACAACCTAATGAGCACAACGGTTTTCATCACACCTTTGCTAGACAGGAATGCAAACCTACCTATAGCACTCAAGACTCAATGAAGGACGTCTACATTcgtgtactgtatttattaccaaaatcaattttttttcgaTTTTAAACGTTAAGAAAGGCAGATCGTAAATCCAGGAATTGGCTATTTTGTATCGTGGCCTTTGCTCTGTTAATACTCGAGTTTAAGCACATTTGTTTGTGCTTATGATGTCAAGTGGATTTCATGTGTTTGTGTCTTTTAGTGGGTATTATTATCTCAGTTAGTAAGCACTGCCTTGGggatattaatgttttatgaaGTTTAAAAAGAAATTGACCTTCTCCTAATGAAAGAGCGAGCTGGATTTCTCCTGCTTTAAGAAACGTTTCGCACAGAAATGCTAACTTGACGTAAACTTCAGTGAATGAAATGTAGAGGTATAATCTTGTTAGAAAGCCTGCATGCTCATTCGGGGAAAATCTTTTTTATACAGcgataaaaacaaaacaaaacaaaacatgatagcacacagaaaaaaaaatgccagaAGGAAATTCTACATAGTGTTGTATTTTATTGCGTGCagtgtaaataaacacactgtaccTCGTCTGGCAGCAGATTTTAACCTGCAGGGGAGATTAAAACAATATGTTTGGGCCTGCAGAAAGAGGTTTAGGGGGAATTGGAAATGCACTTATGTATAATTCAACCGCTGAGATGTAAACAAAGTGCATTTTGATGTGTCAGAGTGTGTTGGTGTGAAAGGATTATAGTTATTCCCTAGAATGCAAATAGAGCCAGTTTATTCACTACCCAAAACTCCCAGTGAACCTATCACTGCTGCCAGGCAAAAATCCTGTTGTCTATCTCCATTTTTAACTTTGATTTACTTTATGGTAAATGGACCAATGCTTTGACTTTCACTACAAATTAGGCCTTTTCCTTCTCttgtaaaaaattacattttggaGATATAAGGTTTTTACCAGACAGTGACAATTAGGAATGCTGataaaggtgaaaaaaattGGTGGTAATTTTGGAAAGGCATTGACTCCTGTTTTGTATCTCTCCACACTGTAAAAGTGATTTTAGCTTATTAGAATAAGCTAAGATATTTTACACCAAACCACTCTGAATAACTTTGTCAATATCGCTACAGCTTAATTATACACAGATTTTTAAGAATCGGTACGATTCCCCTTTAAAGGACCAAGAAATCGTTTAAACAGCACATATGAAAATGAGCTATATTTCCTCACAAGAAGAGGTTGCTCAGTTTGCAGAAAAGAAGAATACGATTTTTTTGTCCTTGTGAATAAGGATCAAAATTTTCTCAGCACTTAAAAAAAGCACAGGAAACTGCCCTAAGTGGCAGGTCGGTTACAGCAATAGGGGGTTGTAATAAGAGCGTTTTAACAATTGAGTGGGTTCTTTGTGACATTTGCAGTCTCCATGTCTTGCTTATTTCACTGGTGTAAGAAAGCCTGCGGCTCATGCTCTTGTGCTGATTGACTACTGCATGTTATGTAAGTGGTTGTCAAGTTGGAAGTTCAGCCTTGTCACAGTGATGAATTAAAAACGTTGTTCCCAGTA

Function

symbol description
plppr3 Predicted to enable lipid phosphatase activity and phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: phospholipid phosphatase-related protein type 3

GO: NA

KEGG:

id description
K19582 LPPR3_4; lipid phosphate phosphatase-related protein type 3/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240185.3 True 4326 mRNA 0.48 8 15828368 15851254

Neighbor

gene id symbol gene type direction distance location
med16 med16,LOC107723868,LOC107753817,LOC107656090 coding upstream 1864 15805602 ~ 15826504 (+)
grin3b grin3b,LOC107656093,LOC107723849,LOC107602803,LOC107753820 coding upstream 39479 15669627 ~ 15788889 (+)
wdr18 wdr18 coding upstream 192124 15520524 ~ 15636244 (+)
LOC103032216 NA coding upstream 311873 15500288 ~ 15516495 (+)
arrdc2 arrdc2,LOC108438640,LOC107753823,LOC107692233,LOC107656095 coding upstream 401373 15417332 ~ 15426995 (+)
palm palm coding downstream 15450 15866704 ~ 15929841 (+)
misp NA coding downstream 80455 15931709 ~ 15945196 (+)
LOC103035507 LOC108437275 coding downstream 97742 15948996 ~ 15957761 (+)
ptbp1 ptbp1,ptbp1b,LOC107753809,LOC107723850,LOC107602808,LOC107674525 coding downstream 111951 15963205 ~ 15976673 (+)
LOC103036428 efna2,LOC108270832,LOC107674568,LOC106574064,LOC107602810 coding downstream 203405 16054659 ~ 16200071 (+)
G42814 NA non-coding upstream 406915 15421152 ~ 15421453 (+)
G42813 NA non-coding upstream 407246 15420712 ~ 15421122 (+)
G42810 NA non-coding upstream 413179 15414677 ~ 15415189 (+)
G42807 NA non-coding upstream 449760 15378001 ~ 15378608 (+)
G42763 NA non-coding upstream 662674 15164715 ~ 15165694 (+)
G43035 NA non-coding downstream 183944 16035198 ~ 16037119 (+)
G43063 NA non-coding downstream 400677 16251931 ~ 16253694 (+)
G43062 NA non-coding downstream 400969 16252223 ~ 16261729 (+)
G43097 sgta,LOC106613600 non-coding downstream 540176 16391430 ~ 16398266 (+)
G43136 NA non-coding downstream 664403 16515657 ~ 16530444 (+)
G42605 NA other upstream 929120 14895062 ~ 14899248 (+)
eps15l1 eps15l1 other upstream 1693822 14070423 ~ 14134546 (+)
LOC103037142 LOC108429501 other upstream 1971007 13810833 ~ 13857361 (+)
LOC103034435 NA other upstream 2206326 13617083 ~ 13622042 (+)
LOC103032215 NA other upstream 2306111 13509020 ~ 13522257 (+)
LOC103036127 cunh19orf24 other downstream 127232 15978486 ~ 15984632 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other downstream 589677 16440931 ~ 16446287 (+)
LOC103044285 NA other downstream 965347 16816601 ~ 16819251 (+)
LOC111192574 NA other downstream 1097126 16948380 ~ 16950360 (+)
dda1 dda1,LOC105913185,LOC107685208,LOC105012003 other downstream 1161213 17012467 ~ 17017856 (+)

Expression


Co-expression Network