c5h19orf25 (cunh19orf25)


Basic Information

Item Value
gene id c5h19orf25
gene name cunh19orf25
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 16446720 ~ 16449054 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007240209.3
GCGTtagaaatgtgaaatgtttaCCACAGAGCAAATCTGAAGAAGTATGACGACAACAAGCAACGTTTCACAGCCTCGTTGGCTGTCAGTATCAGTGAGTTAGCGTTAGTTATTTTTCTACAGAGGAGCTTCATTTATGACAAGAGTTTCTGTACATGTTTCTTAATGTCTCTTAATCACTGGGGGGATTAATGCGTCCTCCCGCTTAAAGCTGAGGTAAAGCAGCGTTAGCCCCCAGAGCTACAGCGAGCAGCCGGAGTGTGTGGAGCTGCACCTGCAGGAGAACAGGATGAATCTGGGCTCTAAAGGCAAGAAGAGGATGGTTCTCCCGACCAGACCTGACCCGCCTTCAGTGGAGCAGATCATAGATGACATAAACCGAGCCTACCCCAACGACCCGGTCTTCAGCATACTGCAGGAACAGTCCACTGAAGACGTCCGCAGTGGATCGACTATCAGTGACGTGGAGGTCAGGTACCTGCAGAGCCGGCGGTTCCTGGAGCTGAACGAGCGGCTTCAGGAGGCACGTTCTGATCTCGTACGGAGAAGAGAAGAGCTGAGGGTGGTGGGGGAGTCTTTAGAACAGAGTGTAACAGAGGTGAAGGACAGAGCCATTTGACTGACCATTTTACATGCTGTTAGAAGCCCACAACACCTTTTAATATGGTGGATGGAGTGGGATAAATGATTAAGTTATGatttgctatgtttttttttttgtttaaacgtCTTTGTAGTTTAAGTGTTTAGAGGTATGAAGCCAGGCCAACACATAATACCATCTAACTACAGTGCCTACTGTGTAAGTATTAATTTAGGCAACATTTTGGagatttgttgttttgttatttgtcACTTGATGTTTGAATTCACAAATTCTGACTTTATTTTTGGACATTATTAAGAAAATTATTTGATTGTGGTCTTTAGCATAACCACCACAATCCTGTTTCTTAAACATTGCTTTTTGATTTTAGCACATGCCACACTTTTACCAAGAGGTAAATATGGTTCCTCATGATTCCTCTTTATATTTAAGTGTTCATGGCGGCTGTTATAACTTCACTGTGGGATGTCTTCACCAAAATCCTGCAGTTAATGCAAGAAAATATGGTTTGTAATACTTTTGCActtattaaatgaaaatgaaaattga

Function

NR:

description
UPF0449 protein C19orf25 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007240209.3 True 1156 mRNA 0.42 2 16446720 16449054

Neighbor

gene id symbol gene type direction distance location
LOC103039257 NA coding upstream 12640 16414203 ~ 16434080 (+)
thop1 thop1,LOC107658499,LOC107568058,LOC107592556 coding upstream 34712 16399544 ~ 16412008 (+)
LOC103037033 LOC108437281,LOC108270814,LOC107723845 coding upstream 81567 16358717 ~ 16365153 (+)
LOC103036728 si:ch73-60h1.1,LOC103036728,LOC108437280,LOC107602811,LOC107723863,LOC108270791,LOC107674560,LOC107656080 coding upstream 94481 16316587 ~ 16352239 (+)
LOC103036428 efna2,LOC108270832,LOC107674568,LOC106574064,LOC107602810 coding upstream 246649 16054659 ~ 16200071 (+)
LOC103039567 diras1,diras1a,LOC108437290,LOC107592551,LOC107669021,LOC107745338,LOC100707435,LOC103373792,LOC101171042 coding downstream 56961 16506015 ~ 16525082 (+)
LOC103042034 LOC108437262 coding downstream 249937 16698991 ~ 16701356 (+)
ndufa11 ndufa11,LOC107747164,LOC107685299 coding downstream 259000 16708054 ~ 16712430 (+)
nrtn NA coding downstream 278145 16727199 ~ 16759637 (+)
pole4 pole4,LOC107680508,LOC107597157,LOC107747219 coding downstream 403038 16852092 ~ 16856550 (+)
G43097 sgta,LOC106613600 non-coding upstream 48454 16391430 ~ 16398266 (+)
G43062 NA non-coding upstream 184991 16252223 ~ 16261729 (+)
G43063 NA non-coding upstream 193026 16251931 ~ 16253694 (+)
G43035 NA non-coding upstream 409601 16035198 ~ 16037119 (+)
G42814 NA non-coding upstream 1025267 15421152 ~ 15421453 (+)
G43136 NA non-coding downstream 66603 16515657 ~ 16530444 (+)
G43163 vmac,LOC107680554 non-coding downstream 253196 16702250 ~ 16704192 (+)
G43180 NA non-coding downstream 266506 16715560 ~ 16715795 (+)
G43185 NA non-coding downstream 273385 16722439 ~ 16722646 (+)
G43188 NA non-coding downstream 298772 16747826 ~ 16748678 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other upstream 433 16440931 ~ 16446287 (+)
LOC103036127 cunh19orf24 other upstream 462088 15978486 ~ 15984632 (+)
G42605 NA other upstream 1547472 14895062 ~ 14899248 (+)
eps15l1 eps15l1 other upstream 2312174 14070423 ~ 14134546 (+)
LOC103037142 LOC108429501 other upstream 2589359 13810833 ~ 13857361 (+)
LOC103044285 NA other downstream 367547 16816601 ~ 16819251 (+)
LOC111192574 NA other downstream 499326 16948380 ~ 16950360 (+)
dda1 dda1,LOC105913185,LOC107685208,LOC105012003 other downstream 563413 17012467 ~ 17017856 (+)
G43360 apba3,si:ch73-40i7.5,LOC108271288,LOC105910839,LOC107750992 other downstream 744484 17193538 ~ 17196116 (+)
adgrl2 adgrl2 other downstream 1184042 17633096 ~ 17768954 (+)

Expression


Co-expression Network