Item | Value |
---|---|
gene id | med16 |
gene name | med16,LOC107723868,LOC107753817,LOC107656090 |
gene type | coding |
species | mexican tetra (Astyanax mexicanus) |
category of species | ornamental fish |
Item | Value |
---|---|
chromosome id | NC_035901.1 |
NCBI id | CM008304.1 |
chromosome length | 40584741 |
location | 15805602 ~ 15826504 (+) |
genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
symbol | description |
---|---|
med16 | Predicted to be involved in positive regulation of transcription, DNA-templated. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED16 (mediator complex subunit 16). |
description |
---|
PREDICTED: mediator of RNA polymerase II transcription subunit 16 |
id | name | namespace |
---|---|---|
GO:0008152 | metabolic process | biological_process |
GO:0003824 | catalytic activity | molecular_function |
id | description |
---|---|
K15159 | MED16; mediator of RNA polymerase II transcription subunit 16 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_022669688.1 | True | 3314 | mRNA | 0.51 | 14 | 15805602 | 15826504 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
grin3b | grin3b,LOC107656093,LOC107723849,LOC107602803,LOC107753820 | coding | upstream | 16713 | 15669627 ~ 15788889 (+) |
wdr18 | wdr18 | coding | upstream | 169358 | 15520524 ~ 15636244 (+) |
LOC103032216 | NA | coding | upstream | 289107 | 15500288 ~ 15516495 (+) |
arrdc2 | arrdc2,LOC108438640,LOC107753823,LOC107692233,LOC107656095 | coding | upstream | 378607 | 15417332 ~ 15426995 (+) |
LOC111192508 | NA | coding | upstream | 392033 | 15404982 ~ 15413569 (+) |
plppr3 | plppr3,LOC107753813,LOC107593129,LOC107602805,LOC107656087,LOC107723853 | coding | downstream | 1864 | 15828368 ~ 15851254 (+) |
palm | palm | coding | downstream | 40200 | 15866704 ~ 15929841 (+) |
misp | NA | coding | downstream | 105205 | 15931709 ~ 15945196 (+) |
LOC103035507 | LOC108437275 | coding | downstream | 122492 | 15948996 ~ 15957761 (+) |
ptbp1 | ptbp1,ptbp1b,LOC107753809,LOC107723850,LOC107602808,LOC107674525 | coding | downstream | 136701 | 15963205 ~ 15976673 (+) |
G42814 | NA | non-coding | upstream | 384149 | 15421152 ~ 15421453 (+) |
G42813 | NA | non-coding | upstream | 384480 | 15420712 ~ 15421122 (+) |
G42810 | NA | non-coding | upstream | 390413 | 15414677 ~ 15415189 (+) |
G42807 | NA | non-coding | upstream | 426994 | 15378001 ~ 15378608 (+) |
G42763 | NA | non-coding | upstream | 639908 | 15164715 ~ 15165694 (+) |
G43035 | NA | non-coding | downstream | 208694 | 16035198 ~ 16037119 (+) |
G43063 | NA | non-coding | downstream | 425427 | 16251931 ~ 16253694 (+) |
G43062 | NA | non-coding | downstream | 425719 | 16252223 ~ 16261729 (+) |
G43097 | sgta,LOC106613600 | non-coding | downstream | 564926 | 16391430 ~ 16398266 (+) |
G43136 | NA | non-coding | downstream | 689153 | 16515657 ~ 16530444 (+) |
G42605 | NA | other | upstream | 906354 | 14895062 ~ 14899248 (+) |
eps15l1 | eps15l1 | other | upstream | 1671056 | 14070423 ~ 14134546 (+) |
LOC103037142 | LOC108429501 | other | upstream | 1948241 | 13810833 ~ 13857361 (+) |
LOC103034435 | NA | other | upstream | 2183560 | 13617083 ~ 13622042 (+) |
LOC103032215 | NA | other | upstream | 2283345 | 13509020 ~ 13522257 (+) |
LOC103036127 | cunh19orf24 | other | downstream | 151982 | 15978486 ~ 15984632 (+) |
LOC103040819 | reep6,LOC107698004,LOC107745351,LOC107658751 | other | downstream | 614427 | 16440931 ~ 16446287 (+) |
LOC103044285 | NA | other | downstream | 990097 | 16816601 ~ 16819251 (+) |
LOC111192574 | NA | other | downstream | 1121876 | 16948380 ~ 16950360 (+) |
dda1 | dda1,LOC105913185,LOC107685208,LOC105012003 | other | downstream | 1185963 | 17012467 ~ 17017856 (+) |