plvap


Basic Information

Item Value
gene id plvap
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035901.1
NCBI id CM008304.1
chromosome length 40584741
location 16945290 ~ 16946977 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022669704.1
GATGCAAAACCTGCTAGTGTTTACATGTCTGGATTCAACTCTGTGTTAAAGCTGTGCTTgaaagaacactttttttttggcagagATGTACAACAACAGCTACAACCGGCCCAAGGTCGCTCTGGAGAAGAAGGTCATTCACAAGTCCAAAGGAAAAAGCTGCGGCTATTATCTGCGGATTGTGTTTTTCTTCTCGTCACTCATTCAGTCGCTCATCATTGTCAGCCTGGTGCTCTTCTTGGTTTACGGGCAGCCTGAGAAGTCTGCTGAGGAGAAGAGGGCAGAGGAGCTTCAGGAGGGCTACAACAGGCTGTCCAAGGACAACGCCAACCTAAGGAAGGACAAAGTCAACCTCACCAGCTTGCTTAAGACAAAGACAGCCGAGAAGACCATGGCTGACAAACAGCTGGCTAAGCTCACAACTGAGTTGGAGGCAGCCAAATCGAATAATACAAAACTTGTGAATGCCCTgTCTATCTGTAATGCAAATAAACCAATGATAAGTCGCCTTGCTCCAGCCCCATGCCCTGCAGTCAGTACGTCCAGTAATGCTCACCTTAAAAGTCTACAGACTGTCTTGGACCACCAGAGAGTTCTGTACATGCTTCTCCAGAACAATTTCACTCAAACAGTGCAAACCCTTAAGCACGACTTAGAGCGTGTGGCCAGTGAGAAAAGCAGGTACGAGATGGAAGCGACACAGCTGAAGCAAGAAAAAGGAGACCTGACCAGCGAACTTCAGCTTTTCAGGAAAAAGTGCAAGGAAGACTTTGTGTCATCTCTGCAGGGCATTCAGACGGTGTCCACCGCCTTCCTGGCCAAAATCGACAATCTCTTCCCCGACAGCTACACTTTCCTCCTCACGTGTGACAAGCAGCAGGAACAGATGCAGAAGATCCAAGACAACTGCACCAACCTGTCCCGGCAGGTGGAGAGCAAGTTCCAGAGCTACCTGAACATAGTCGGCGACAAGGTCTCCACCCTCCAGGGCCAGAGCAGCCGGCTAGAAGTGCAGAACAGACGGCTGACTTCGGATATGCAGCAGTGCAGCCAGAGCCGCACCCAAGAAACCGCACAGTGCAAGAAGTTGCTAGCAGACGCCCAGGAGACACAAGACAGACTGGTGGAGCCTCTGCTGCAGGCCCAGAAACAACTGATGCAAGAAAAGCAAATGTTACAGACCATGTGTGCTCCAAAGCCAATACTGCCCTCAATGCCAAGACCCTCTGGACTGAACTCACATGGACCATAGAAGGTACATTTAATCAAAACTATTgcaaaaactgataaaaaaaaa

Function

GO:

id name namespace
GO:0007219 Notch signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022669704.1 True 1297 mRNA 0.49 4 16945290 16946977

Neighbor

gene id symbol gene type direction distance location
babam1 babam1,LOC107597198 coding upstream 8384 16931500 ~ 16936906 (+)
LOC103044574 LOC103044574,LOC108437267,LOC106613702,LOC106573554,LOC103463524,LOC102231954,LOC107553533 coding upstream 82129 16860122 ~ 16863161 (+)
pole4 pole4,LOC107680508,LOC107597157,LOC107747219 coding upstream 88740 16852092 ~ 16856550 (+)
nrtn NA coding upstream 185653 16727199 ~ 16759637 (+)
ndufa11 ndufa11,LOC107747164,LOC107685299 coding upstream 232860 16708054 ~ 16712430 (+)
ano8 ano8,ano8b,LOC107680545,LOC107747324 coding downstream 28667 16975644 ~ 17010525 (+)
abhd8 abhd8 coding downstream 71352 17018329 ~ 17027124 (+)
gamt gamt,LOC107747770,LOC107685360,LOC107757934,LOC107597217 coding downstream 106434 17053411 ~ 17057107 (+)
tmem38a tmem38a,LOC107730482,LOC107658508,LOC107751025 coding downstream 300104 17247081 ~ 17253787 (+)
comp comp,LOC107733073,LOC107665851,LOC107680551,LOC107747026 coding downstream 312388 17259365 ~ 17269526 (+)
G43198 NA non-coding upstream 102285 16838491 ~ 16843005 (+)
G43196 NA non-coding upstream 157678 16786571 ~ 16787612 (+)
G43188 NA non-coding upstream 196612 16747826 ~ 16748678 (+)
G43185 NA non-coding upstream 222644 16722439 ~ 16722646 (+)
G43180 NA non-coding upstream 229495 16715560 ~ 16715795 (+)
G43233 NA non-coding downstream 83532 17030509 ~ 17031395 (+)
G43248 dazap1 non-coding downstream 91594 17038571 ~ 17047109 (+)
G43251 ndufs7,LOC107685366,LOC107747413,LOC107680537,LOC107597168,LOC107553547 non-coding downstream 111432 17058409 ~ 17063971 (+)
G43252 LOC108435930,LOC107597167,LOC107757917,LOC107685268 non-coding downstream 118370 17065347 ~ 17072232 (+)
G43253 NA non-coding downstream 129715 17076692 ~ 17080295 (+)
LOC103044285 NA other upstream 126039 16816601 ~ 16819251 (+)
LOC103040819 reep6,LOC107698004,LOC107745351,LOC107658751 other upstream 499003 16440931 ~ 16446287 (+)
LOC103036127 cunh19orf24 other upstream 960658 15978486 ~ 15984632 (+)
G42605 NA other upstream 2046042 14895062 ~ 14899248 (+)
eps15l1 eps15l1 other upstream 2810744 14070423 ~ 14134546 (+)
LOC111192574 NA other downstream 1403 16948380 ~ 16950360 (+)
dda1 dda1,LOC105913185,LOC107685208,LOC105012003 other downstream 65490 17012467 ~ 17017856 (+)
G43360 apba3,si:ch73-40i7.5,LOC108271288,LOC105910839,LOC107750992 other downstream 246561 17193538 ~ 17196116 (+)
adgrl2 adgrl2 other downstream 686119 17633096 ~ 17768954 (+)
G43537 NA other downstream 1065196 18012173 ~ 18014499 (+)

Expression


Co-expression Network