Gene
RNA
| Item | Value |
|---|---|
| gene id | G47854 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 11645527 ~ 11648165 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54458 | True | 2151 | lncRNA | 0.38 | 2 | 11645527 | 11648165 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_11636228_11638176 | CAMKK2 | coding | downstream | 7351 | 11636228 ~ 11638176 (-) |
| CI01000006_11627878_11631177 | NA | coding | downstream | 14350 | 11627194 ~ 11631177 (-) |
| CI01000006_11596063_11609407 | NA | coding | downstream | 36120 | 11595639 ~ 11609407 (-) |
| CI01000006_11530728_11535297 | NA | coding | downstream | 109627 | 11530366 ~ 11535900 (-) |
| CI01000006_11459706_11462546 | NA | coding | downstream | 182922 | 11459288 ~ 11462605 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | coding | upstream | 2748 | 11650363 ~ 11654424 (-) |
| CI01000006_11659293_11664444 | ADORA2AB | coding | upstream | 10768 | 11658933 ~ 11666250 (-) |
| CI01000006_11672314_11695885 | SPECC1L, SPECC1LB | coding | upstream | 23689 | 11671854 ~ 11695920 (-) |
| CI01000006_11715016_11740679 | SPTAN1, SPNA2 | coding | upstream | 66540 | 11714705 ~ 11740763 (-) |
| CI01000006_11753992_11763149 | ODF2, ODF2A | coding | upstream | 105563 | 11753728 ~ 11763149 (-) |
| G47853 | NA | non-coding | downstream | 4263 | 11640429 ~ 11641264 (-) |
| G47812 | NA | non-coding | downstream | 140565 | 11503578 ~ 11504962 (-) |
| G47806 | NA | non-coding | downstream | 163026 | 11479106 ~ 11482501 (-) |
| G47758 | NA | non-coding | downstream | 353046 | 11287635 ~ 11292481 (-) |
| G47681 | NA | non-coding | downstream | 530016 | 11111614 ~ 11115511 (-) |
| G47705 | NA | non-coding | upstream | 56762 | 11704927 ~ 11708257 (-) |
| G47861 | NA | non-coding | upstream | 117069 | 11765234 ~ 11765587 (-) |
| G47863 | NA | non-coding | upstream | 121773 | 11769938 ~ 11770242 (-) |
| G47864 | NA | non-coding | upstream | 123978 | 11772143 ~ 11772426 (-) |
| G47868 | NA | non-coding | upstream | 129246 | 11777411 ~ 11777636 (-) |
| G47658 | NA | other | downstream | 612400 | 11030911 ~ 11033127 (-) |
| CI01000006_10453630_10483241 | NA | other | downstream | 1157092 | 10453613 ~ 10484006 (-) |
| CI01000006_07500281_07507754 | NA | other | downstream | 4134571 | 7500246 ~ 7507976 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 4668655 | 6973224 ~ 6976872 (-) |
| CI01000006_04560607_04560993 | NA | other | downstream | 7083459 | 4559509 ~ 4562068 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 686244 | 12347180 ~ 12349383 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | other | upstream | 702594 | 12569205 ~ 12582487 (-) |
