G47362


Basic Information

Item Value
gene id G47362
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 11668374 ~ 11668589 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU53882
GGAGTTTAGTTAGAATCGTTTAGTTTGTAGCCTATGCTATTTTTTATCGTTTGTAAGCCCGCTTTGAAATGTACATACTCAGCCAGCACAATGGGCCAGCTGATGTGAACGTGAGGATAAGGAAGTGAGGGACCTGTTAGGTACCGTGAGGTTGTGTGGTTTCTCACGTACAGCTGAAACATCCTGCTTCACCTCAGGGCCACATGAAGATAAATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU53882 True 216 lncRNA 0.45 1 11668374 11668589

Neighbor

gene id symbol gene type direction distance location
CI01000006_11546432_11575289 NSMFA coding upstream 92898 11546432 ~ 11575476 (+)
CI01000006_11476139_11503761 PNPLA7 coding upstream 163776 11476139 ~ 11504598 (+)
CI01000006_11469982_11473164 CLIC4, CLIC3 coding upstream 194747 11469129 ~ 11473627 (+)
CI01000006_11452997_11455817 POU5F3 coding upstream 211812 11452241 ~ 11456562 (+)
CI01000006_11436920_11440304 NA coding upstream 228070 11436920 ~ 11440304 (+)
CI01000006_11704767_11714559 WDR34 coding downstream 36178 11704767 ~ 11714661 (+)
CI01000006_11751944_11752854 NA coding downstream 82265 11750854 ~ 11753218 (+)
CI01000006_11784520_11803562 NA coding downstream 113442 11782031 ~ 11803850 (+)
CI01000006_11888383_11923287 NA coding downstream 219603 11888192 ~ 11924390 (+)
CI01000006_12092807_12095434 NA coding downstream 423800 12092389 ~ 12095668 (+)
G47315 NA non-coding upstream 141358 11526788 ~ 11527016 (+)
CI01000006_11429439_11432136 NA non-coding upstream 232525 11428774 ~ 11432797 (+)
G47299 NA non-coding upstream 252670 11415438 ~ 11415704 (+)
G47298 NA non-coding upstream 253195 11414756 ~ 11415179 (+)
G47368 NA non-coding downstream 16046 11684635 ~ 11684975 (+)
G47333 NA non-coding downstream 46097 11714686 ~ 11720080 (+)
G47390 NA non-coding downstream 121622 11790211 ~ 11790433 (+)
G47912 NA non-coding downstream 165643 11834232 ~ 11834488 (+)
G47916 NA non-coding downstream 169163 11837752 ~ 11838191 (+)
G47318 NA other upstream 30122 11624267 ~ 11638252 (+)
G47159 NA other upstream 146671 11416229 ~ 11521703 (+)
G47145 NA other upstream 1156568 10485358 ~ 10511806 (+)
G46652 NA other upstream 1509123 10156579 ~ 10159251 (+)
G45416 NA other upstream 2833677 8818814 ~ 8834697 (+)
G48094 NA other downstream 609031 12277620 ~ 12279541 (+)
G48081 NA other downstream 708417 12377006 ~ 12384827 (+)

Expression


Co-expression Network