Gene
RNA
| Item | Value |
|---|---|
| gene id | G47877 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 11789624 ~ 11789823 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU54481 | True | 200 | lncRNA | 0.54 | 1 | 11789624 | 11789823 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_11779363_11781944 | NA | coding | downstream | 7636 | 11779325 ~ 11781988 (-) |
| CI01000006_11753992_11763149 | ODF2, ODF2A | coding | downstream | 26475 | 11753728 ~ 11763149 (-) |
| CI01000006_11715016_11740679 | SPTAN1, SPNA2 | coding | downstream | 48861 | 11714705 ~ 11740763 (-) |
| CI01000006_11672314_11695885 | SPECC1L, SPECC1LB | coding | downstream | 93704 | 11671854 ~ 11695920 (-) |
| CI01000006_11659293_11664444 | ADORA2AB | coding | downstream | 123374 | 11658933 ~ 11666250 (-) |
| CI01000006_12195900_12218340 | KIAA1328 | coding | upstream | 406077 | 12195900 ~ 12218340 (-) |
| CI01000006_12223358_12227336 | NA | coding | upstream | 433489 | 12223312 ~ 12227427 (-) |
| CI01000006_12238313_12238815 | NA | coding | upstream | 448490 | 12238313 ~ 12239051 (-) |
| CI01000006_12252567_12267751 | UBAP2, UBAP2A | coding | upstream | 462108 | 12251931 ~ 12267751 (-) |
| CI01000006_12274550_12280868 | DCAF12 | coding | upstream | 483258 | 12273081 ~ 12280868 (-) |
| G47873 | NA | non-coding | downstream | 5660 | 11783605 ~ 11783964 (-) |
| G47871 | NA | non-coding | downstream | 9243 | 11780010 ~ 11780381 (-) |
| G47869 | NA | non-coding | downstream | 11107 | 11778165 ~ 11778517 (-) |
| G47868 | NA | non-coding | downstream | 11988 | 11777411 ~ 11777636 (-) |
| G47864 | NA | non-coding | downstream | 17198 | 11772143 ~ 11772426 (-) |
| G47879 | NA | non-coding | upstream | 4127 | 11793950 ~ 11794211 (-) |
| G47883 | NA | non-coding | upstream | 8819 | 11798642 ~ 11798905 (-) |
| G47885 | NA | non-coding | upstream | 9917 | 11799740 ~ 11800111 (-) |
| G47887 | NA | non-coding | upstream | 11771 | 11801594 ~ 11801814 (-) |
| G47888 | NA | non-coding | upstream | 12415 | 11802238 ~ 11802458 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | downstream | 135217 | 11650363 ~ 11654424 (-) |
| G47658 | NA | other | downstream | 756497 | 11030911 ~ 11033127 (-) |
| CI01000006_10453630_10483241 | NA | other | downstream | 1301189 | 10453613 ~ 10484006 (-) |
| CI01000006_07500281_07507754 | NA | other | downstream | 4278668 | 7500246 ~ 7507976 (-) |
| CI01000006_06974359_06976736 | NA | other | downstream | 4812752 | 6973224 ~ 6976872 (-) |
| CI01000006_12348300_12348961 | GLRX | other | upstream | 544586 | 12347180 ~ 12349383 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | other | upstream | 560936 | 12569205 ~ 12582487 (-) |
