G76948 (LOC103039036)


Basic Information

Item Value
gene id G76948
gene name LOC103039036
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 43618 ~ 48431 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103749
TTTCTACAATATTAGAATCAGACAAGCATTAACATGCAAAGACAACATGTGACTCTAAAACACTGCAATATATCGTCTATATTGAAAACTATATGATCTATTCCCAAATTATATCTTATTTCACAATTCATTATTTCACTACCATCAAACACGACCATTCACATTTTATATCCTACTGAGGGTCTCTGTTTTCTGACACAATACTGCCACCTGatggtaaataataaaaatcagaaCTAATCCACATTATAAAGTTTCAGATTAATTATAAACACAGATTATTATTCTACTTattgtctgtatatatatattaatacattcattgcagaatatttacagaagcttgtaaaaaaaaaaaaaagaaacttgtaaaaaaaacagtgtgggTGTCCAGTATAATCgtgcaatatattttaatgtcaaacacATTTTTCATTCAATTTGTGCATTTCCTGCtttgttgaaataaaaaaaacagtgaaattaTCAAGAATCCTcctttttaaagcaataaaatgaGTGCAACCGCAAACAAGTTctaattattacattaaaactCTGACTGAtcatgaaatgtatttttttgtattttaacaatTCCAATATCAAGCATTTAGGAAATATTCATCAAATGATCACAAATACCACTTTCATTAATACACGTATTtatgtattaaatacataatatcAGCATCAACCTcctaaatactttatttttttttcactttctttaCCTGCTGCCATAAAACCACCTTTTACTAACTAAAGCTTTCAAACATCATCacacttttaataaaacattcttTACATATTGTGACCATTTCCTTTTGCaataattcaattaattaaacatGTAAACACTGAAGACATGTATGTGGacaagtattttgttttttttatcattaaagtaaatatagaataattcatagtagatacagaattgtgcgtcataaaaattaaaaaaggtcaatatatacaaaatgcaACTAAAGGTTAAGGAGCTAAGAACTAATACTCTAAAAAGAACCTCCCACTGTCGATCTTAGTGGTGGAAATCTCATGATTTGAGGGGTTTTCAGCCAATAaatcatataataatataataataaacactataaTGTGGAGATGATGCCCAGCAATGATCATCTAAAGCAgcttcagaataaaaaatacctTCAAGTTCTGAAAAGAGCAGGAAACAGAAATTCTGATCTGATCTGGAGACGAGTTAAAAACAGAAGCGCTGAACTCTGGGAGTTTATCTTCTAGCTCTGATCAGCAGATTAAAGTACATTAAGGCCATCAGCACACTGAAGGTCATTAAACTGATTAAAGAGCTCAGTATTCGGGACGATGTTTCAGATTAAGATgctcttatttataaacataataaagatgATCTTTCAGCTTCAGAAGAAGTCATGAGCTGGAAACAAATAGGAAAAGAAAAGGTGATTATAGATCTGATTCTACAAGCTGTTTTATTTCACATACATTATTCTCAGACTCTCAGGCTCTTCTCTTACAGATAAACTGAATGTTTATGGTGGAGAATAAGCTAAAACCCGACCGTGTGGTTCATTCAGATCAGTCccagcagagcttcagctgaatcattagattagattatcAGCAGGTACTGGACTTTTATCGAgttataaaaagtaaaagatgAAGAGAGGTCGGTCTGGAGTCAGAACCCGTTTATTATCAGGGTCGTGTTCTGTGAGCCTCAGGAACCAGAGTGGTCGCTGCGCTCAGAGGACCCGAATACGCTGAGCTGAAGTTCTGCAGTCCAACAATCAGACACTTCCAGCTGTAGCGCAGAGCTTTACCCACATTCTGAACTTCTTTAATTTCTGCCGctgtttcttcttctctctctgggtCTCCGGGTCCGGGTCCGGGTCCGGGTCGGGGGTCCGGTCCTCCTGCAGGGGCTGGTACCGGTCGGGCAGCAGAGCTATATGAACCAGTTTAGatgattttttgtattttttggaggATCTGTTTTCTCTCAGACTGTTATTACTGCACTCCGCTCTCTGATCACTCCTCTGATCACTCCTTCTCTCACTCCTCTGAtcactcctctcactctcctcctcaCTCTCTATAATCTGGGTCTGGTCCTCCTGGTTTCTGGATCTCCTGGATCTGCGGAGCTTCGTCTCGCGGGTCATTCTGTACCTGTTTCTCTCTGAGCGGCAG

Function

NR:

description
uncharacterized protein C1orf115-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103749 True 2211 lncRNA 0.36 2 43618 48431

Neighbor

gene id symbol gene type direction distance location
apob NA coding downstream 4370 52801 ~ 75885 (+)
tpp1 tpp1 coding downstream 114597 163028 ~ 173869 (+)
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding downstream 129975 178406 ~ 189134 (+)
disp2 disp2 coding downstream 272876 321307 ~ 337947 (+)
ccdc32 cunh15orf57,LOC103043985 coding downstream 303722 352153 ~ 354980 (+)
G76969 NA non-coding downstream 64897 113328 ~ 117452 (+)
G76970 NA non-coding downstream 64988 113419 ~ 118770 (+)
G76971 NA non-coding downstream 67370 115801 ~ 116599 (+)
G76972 NA non-coding downstream 75355 123786 ~ 124792 (+)
G76984 NA non-coding downstream 120782 169213 ~ 169503 (+)
ldah ldah other downstream 36288 84719 ~ 133303 (+)
G77059 NA other downstream 471202 519633 ~ 520590 (+)
G77154 NA other downstream 583283 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 834866 883297 ~ 935678 (+)
G77212 NA other downstream 956698 1005129 ~ 1008842 (+)

Expression


Co-expression Network