ldah (ldah)


Basic Information

Item Value
gene id ldah
gene name ldah
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 84719 ~ 133303 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103775
gagaagaagagcGGGTTGTTTATATGAGGAGCAGAGtccagatttctctcctaaaaactaaaaaaactccTGTTTTTACCGGATTTACCTCCAGAAAACACCTCAAATCCCGCAGCGcagcagcagcaggtggtTCTGATCCGGGTGGAGGGATGGGAGGTTCTGGGTTTGATGGAGGTAGAGAGGAGGCTGCTGTggagtttatttactgtaaaggtGTCGCTACTGAGCTTCTGAAATACGGACCCAGAGATCTTCATGCTGCTGCTGAAACCCCCGACCCCCCCAGAGTGCTCATCCTTGTCATTCCAGGTAACCCAGGTGTAGTGGGGTTTTATAAGACCTTCATGTGGACGCTGTATCAGGCCTTTAACCGGCGGTACCCGGTGTGGAGCGTGGGTCACGCTGGACACTGTGTTCCACCAGACACCATGGACATGGTAGAAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGTGTTGAAATCTGTGCTGCTGTTTCCGACTATCGAGCGCATGGCCGTTACTCCTCAGGGGAAAGTGATGACCCCTCTGCTCTGTAATCTGCGCTACACCGCTTACCTGCCCGTATTCCTGCTTTCACTGCTGCCCGAGAGACTGAAGACCG
>TU103776
gagaagaagagcGGGTTGTTTATATGAGGAGCAGAGtccagatttctctcctaaaaactaaaaaaactccTGTTTTTACCGGATTTACCTCCAGAAAACACCTCAAATCCCGCAGCGcagcagcagcagcagcaggtggtTCTGATCCGGGTGGAGGGATGGGAGGTTCTGGGTTTGATGGAGGTAGAGAGGAGGCTGCTGTggagtttatttactgtaaaggtGTCGCTACTGAGCTTCTGAAATACGGACCCAGAGATCTTCATGCTGCTGCTGAAACCCCCGACCCCCCCAGAGTGCTCATCCTTGTCATTCCAGGTAACCCAGGTGTAGTGGGGTTTTATAAGACCTTCATGTGGACGCTGTATCAGGCCTTTAACCGGCGGTACCCGGTGTGGAGCGTGGGTCACGCTGGACACTGTGTTCCACCAGACACCATGGACATGGTAGAAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGTGTTGAAATCTGTGCTGCTGTTTCCGACTATCGAGCGCATGGCCGTTACTCCTCAGGGGAAAGTGATGACCCCTCTGCTCTGTAATCTGCGCTACACCGCTTACCTGCCCGTATTCCTGCTTTCACTGCTGCCCGAGAGACTGAAGACCG
>TU103777
gagaagaagagcGGGTTGTTTATATGAGGAGCAGAGtccagatttctctcctaaaaactaaaaaaactccTGTTTTTACCGGATTTACCTCCAGAAAACACCTCAAATCCCGCAGCGGTGAGAAGCTCCATCCTCTATAAACTCCCAGAACCCtcagcagcagcagcaggtggtTCTGATCCGGGTGGAGGGATGGGAGGTTCTGGGTTTGATGGAGGTAGAGAGGAGGCTGCTGTggagtttatttactgtaaaggtGTCGCTACTGAGCTTCTGAAATACGGACCCAGAGATCTTCATGCTGCTGCTGAAACCCCCGACCCCCCCAGAGTGCTCATCCTTGTCATTCCAGGTAACCCAGGTGTAGTGGGGTTTTATAAGACCTTCATGTGGACGCTGTATCAGGCCTTTAACCGGCGGTACCCGGTGTGGAGCGTGGGTCACGCTGGACACTGTGTTCCACCAGACACCATGGACATGGTAGAAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGTGTTGAAATCTGTGCTGCTGTTTCCGACTATCGAGCGCATGGCCGTTACTCCTCAGGGGAAAGTGATGACCCCTCTGCTCTGTAATCTGCGCTACACCGCTTACCTGCCCGTATTCCTGCTTTCACTGCTGCCCGAGAGACTGAAGACCG
>TU103778
gagaagaagagcGGGTTGTTTATATGAGGAGCAGAGtccagatttctctcctaaaaactaaaaaaactccTGTTTTTACCGGATTTACCTCCAGAAAACACCTCAAATCCCGCAGCGGTGAGAAGCTCCATCCTCTATAAACTCCCAGAACCCtcagcagcagcaggtggtTCTGATCCGGGTGGAGGGATGGGAGGTTCTGGGTTTGATGGAGGTAGAGAGGAGGCTGCTGTggagtttatttactgtaaaggtGTCGCTACTGAGCTTCTGAAATACGGACCCAGAGATCTTCATGCTGCTGCTGAAACCCCCGACCCCCCCAGAGTGCTCATCCTTGTCATTCCAGGTAACCCAGGTGTAGTGGGGTTTTATAAGACCTTCATGTGGACGCTGTATCAGGCCTTTAACCGGCGGTACCCGGTGTGGAGCGTGGGTCACGCTGGACACTGTGTTCCACCAGACACCATGGACATGGTAGAAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGTGTTGAAATCTGTGCTGCTGTTTCCGACTATCGAGCGCATGGCCGTTACTCCTCAGGGGAAAGTGATGACCCCTCTGCTCTGTAATCTGCGCTACACCGCTTACCTGCCCGTATTCCTGCTTTCACTGCTGCCCGAGAGACTGAAGACCG
>TU103780
gagaagaagagcGGGTTGTTTATATGAGGAGCAGAGtccagatttctctcctaaaaactaaaaaaactccTGTTTTTACCGGATTTACCTCCAGAAAACACCTCAAATCCCGCAGCGGTGAGAAGCTCCATCCTCTATAAACTCCCAGAACCCtcagcagcaggtggtTCTGATCCGGGTGGAGGGATGGGAGGTTCTGGGTTTGATGGAGGTAGAGAGGAGGCTGCTGTggagtttatttactgtaaaggtGTCGCTACTGAGCTTCTGAAATACGGACCCAGAGATCTTCATGCTGCTGCTGAAACCCCCGACCCCCCCAGAGTGCTCATCCTTGTCATTCCAGGTAACCCAGGTGTAGTGGGGTTTTATAAGACCTTCATGTGGACGCTGTATCAGGCCTTTAACCGGCGGTACCCGGTGTGGAGCGTGGGTCACGCTGGACACTGTGTTCCACCAGACACCATGGACATGGTAGAAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGTGTTGAAATCTGTGCTGCTGTTTCCGACTATCGAGCGCATGGCCGTTACTCCTCAGGGGAAAGTGATGACCCCTCTGCTCTGTAATCTGCGCTACACCGCTTACCTGCCCGTATTCCTGCTTTCACTGCTGCCCGAGAGACTGAAGACCG
>TU103781
CTCGACTCTCAGACATTAGAACTCCTCTATCACACATTAACTGTTCTGTGTTTCAGCGTCTCTCTGTTATATAAGAGCTGCAGGAACAGTGATCAGTCTAGCTCCTCTCTCTTCACTGTTACTCTGAGTTTTtgctggatgatgatgatgatgatgatgacgatgGGAACGCGATGTACATGGGGAGTCAGGAGATGAGGCTGGTGTTGGAGAGGGATAACTCCACCATACGACACAACCTCCACAAGcttgttttttattACGGAGCTACAGATCACTGGTGTCCTGTTCAGTACTACTTCGACCTGCGGAGAGACTTCCCGGACGGGGACATTCGTCTCTGTGAGAGGGGACATCGCCACGCCTTCGTTCTGGACGCGGGACAGGAGATGGGCGAGATGACCACAGAGTGGATCCGGGAGGAGCTCAGGGGTTTATAGCGCTGATCTTATATGACTTTATTACAGTTCTGATCTAAACTGGATCTGTATTACAGGATACAGGGATTTACCTGATACACCTTATTACAACCTTATTAACACCTTTATTAAGGCCTTATTACAGCCTTTATTACGGGTAATGAAACACTTGAAGACGAGAAGAACTCTGATTGGGTTTGATTCGCAGGGCCACAGCTGTGATTTATTCAGTGatatttaataatgaattattatagTATGACGGAACTGGAAGCTGCGCCTGTTGGTGGCAAAACCAAGCAATTATGaccaaaagccaaaaaactgATGGATCTGTTCATTTAAGAGCTTCTGTCAGGAGTTCATAGAGACAGTTATAGTGAAGTTTATGATGGATTATTAATGATTCTCAGAAGATTATTAAAGATGAATCAATAAATTCTTCCAAATGTTGCATCATAAGTAACAGCTCCTAAAGATTTTAAGTATAatgtttagcattagcatgattAGCTCTCTCTACCAATTCAGAGAATAGAATTACAGAATCATGAATTCTGAACATTACCCCTGAATTGTGTTTAAAGAAAtcatgaacatttttaaataactatgaaattcagtttgttgttgttgcagattttaaaggagaaatccggtaTGAAATGAACTTGTGtacattagtgttttagtgaaacatgaaaacaagtagaaacatttttgttaaatatctcacctctgttctcccccagcgttctgaaatacagagcttttagctgatgctcccaacaggcttacagtgttagtgataggggcatagagttacccGTGCAAAGGAATCactattttacaccattaacaacaaACTCAGTGGTAGAAATCTGAGAGCCTGACattaaaaacaagaaactaagATCTTTTAAAGAGCACAGAGAGTTTATTAAAtactctgtttattatacaCACAGGACCGTCAGGTAggtgttaaaataaagttacGATCAGTCGAAGAACAAGCACAACATTACAGGCAGGAAAAGGGAACAGACTGCAAAATTGGAAATGCATAAATATTACAGAGATTTTTACTTATTTCCATTCATTTATAATTTTCCTGTGTATGAAGCTGCTTGGAGATTaatgttaatggtgtaaaatagtgatttctttgcatgagtagctctatgcccctatcactgcTATTGtgagcctgttgggagcatcggctaaaagctctgAATTTTGCTATTTGAgaaaagtttgtactcattatcatgtttcactacaacacaAGTCtgtttcacaccagatttcacCTTTAATTCTGTTCAGATTCTGTTGAttgatttgcacattttttgagGTTTACATAAAAAACTTCCTCAAAGTGTTTCAccaacattttataaaatgtgaCATAACTGTGATAATAA
>TU103782
CCACTGTCTCGCAGTCCTCTCAGATTAGCTCTGCTTTATTCGGAGCTTCTTGGATGGAGTGAATATCACAGTCTGCCAGACATTGTTCAGGATCTCAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGGAACGCGATGTACATGGGGAGTCAGGAGATGAGGCTGGTGTTGGAGAGGGATAACTCCACCATACGACACAACCTCCACAAGcttgttttttattACGGAGCTACAGATCACTGGTGTCCTGTTCAGTACTACTTCGACCTGCGGAGAGACTTCCCGGACGGGGACATTCGTCTCTGTGAGAGGGGACATCGCCACGCCTTCGTTCTGGACGCGGGACAGGAGATGGGCGAGATGACCACAGAGTGGATCCGGGAGGAGCTCAGGGGTTTATAGCGCTGATCTTATATGACTTTATTACAGTTCTGATCTAAACTGGATCTGTATTACAGGATACAGGGATTTACCTGATACACCTTATTACAACCTTATTAACACCTTTATTAAGGCCTTATTACAGCCTTTATTACGGGTAATGAAACACTTGAAGACGAGAAGAACTCTGATTGGGTTTGATTCGCAGGGCCACAGCTGTGATTTATTCAGTGatatttaataatgaattattatagTATGACGGAACTGGAAGCTGCGCCTGTTGGTGGCAAAACCAAGCAATTATGaccaaaagccaaaaaactgATGGATCTGTTCATTTAAGAGCTTCTGTCAGGAGTTCATAGAGACAGTTATAGTGAAGTTTATGATGGATTATTAATGATTCTCAGAAGATTATTAAAGATGAATCAATAAATTCTTCCAAATGTTGCATCATAAGTAACAGCTCCTAAAGATTTTAAGTATAatgtttagcattagcatgattAGCTCTCTCTACCAATTCAGAGAATAGAATTACAGAATCATGAATTCTGAACATTACCCCTGAATTGTGTTTAAAGAAAtcatgaacatttttaaataactatgaaattcagtttgttgttgttgcagattttaaaggagaaatccggtaTGAAATGAACTTGTGtacattagtgttttagtgaaacatgaaaacaagtagaaacatttttgttaaatatctcacctctgttctcccccagcgttctgaaatacagagcttttagctgatgctcccaacaggcttacagtgttagtgataggggcatagagttacccGTGCAAAGGAATCactattttacaccattaacaacaaACTCAGTGGTAGAAATCTGAGAGCCTGACattaaaaacaagaaactaagATCTTTTAAAGAGCACAGAGAGTTTATTAAAtactctgtttattatacaCACAGGACCGTCAGGTAggtgttaaaataaagttacGATCAGTCGAAGAACAAGCACAACATTACAGGCAGGAAAAGGGAACAGACTGCAAAATTGGAAATGCATAAATATTACAGAGATTTTTACTTATTTCCATTCATTTATAATTTTCCTGTGTATGAAGCTGCTTGGAGATTaatgttaatggtgtaaaatagtgatttctttgcatgagtagctctatgcccctatcactgcTATTGtgagcctgttgggagcatcggctaaaagctctgAATTTTGCTATTTGAgaaaagtttgtactcattatcatgtttcactacaacacaAGTCtgtttcacaccagatttcacCTTTAATTCTGTTCAGATTCTGTTGAttgatttgcacattttttgagGTTTACATAAAAAACTTCCTCAAAGTGTTTCAccaacattttataaaatgtgaCATAACTGTGATAATAA
>XM_022672521.1
CTGTagtaaagagaagaagagcGGGTTGTTTATATGAGGAGCAGAGtccagatttctctcctaaaaactaaaaaaactccTGTTTTTACCGGATTTACCTCCAGAAAACACCTCAAATCCCGCAGCGcagcagcagcagcagcaggtggtTCTGATCCGGGTGGAGGGATGGGAGGTTCTGGGTTTGATGGAGGTAGAGAGGAGGCTGCTGTggagtttatttactgtaaaggtGTCGCTACTGAGCTTCTGAAATACGGACCCAGAGATCTTCATGCTGCTGCTGAAACCCCCGACCCCCCCAGAGTGCTCATCCTTGTCATTCCAGGTAACCCAGGTGTAGTGGGGTTTTATAAGACCTTCATGTGGACGCTGTATCAGGCCTTTAACCGGCGGTACCCGGTGTGGAGCGTGGGTCACGCTGGACACTGTGTTCCACCAGACACCATGGACATGGTAGAAGATGCATGTTTGGCGGAGGCGGAGGACGTGTGTGGCCTGAACGGTCAGATCCAGCATAAACTGGCCTTCCTGTCGGAGCACGTTCCCCGAGACACACACCTGGTGCTGATCGGCCACTCGATTGGCTGCTACATAATCCTGGAGACCATGAGGAGAGACCCGAAGCTAAAGGTGTTGAAATCTGTGCTGCTGTTTCCGACTATCGAGCGCATGGCCGTTACTCCTCAGGGGAAAGTGATGACCCCTCTGCTCTGTAATCTGCGCTACACCGCTTACCTGCCCGTATTCCTGCTTTCACTGCTGCCCGAGAGACTGAAGACCGCATTAGATCAGTCTGTAGTTAGATCAGTCTGGAGTTTAGATCAGTCCTGTAtctctctctctctcttttctgtttccTCTCGTTTCTCAGGGAACGCGATGTACATGGGGAGTCAGGAGATGAGGCTGGTGTTGGAGAGGGATAACTCCACCATACGACACAACCTCCACAAGcttgttttttattACGGAGCTACAGATCACTGGTGTCCTGTTCAGTACTACTTCGACCTGCGGAGAGACTTCCCGGACGGGGACATTCGTCTCTGTGAGAGGGGACATCGCCACGCCTTCGTTCTGGACGCGGGACAGGAGATGGGCGAGATGACCACAGAGTGGATCCGGGAGGAGCTCAGGGGTTTATAGCGCTGATCTTATATGACTTTATTACAGTTCTGATCTAAACTGGATCTGTATTACAGGATACAGGGATTTACCTGATACACCTTATTACAACCTTATTAACACCTTTATTAAGGCCTTATTACAGCCTTTATTACGGGTAATGAAACACTTGAAGACGAGAAGAACTCTGATTGGGTTTGATTCGCAGGGCCACAGCTGTGATTTATTCAGTGatatttaataatgaattattatagTATGACGGAACTGGAAGCTGCGCCTGTTGGTGGCAAAACCAAGCAATTATGaccaaaagccaaaaaactgATGGATCTGTTCATTTAAGAGCTTCTGTCAGGAGTTCATAGAGACAGTTATAGTGAAGTTTATGATGGATTATTAATGATTCTCAGAAGATTATTAAAGATGAATCAATAAATTCTTCCAAATGTTGCATCATAAGTAACAGCTCCTAAAGATTTTAAGTATAatgtttagcattagcatgattAGCTCTCTCTACCAATTCAGAGAATAGAATTACAGAATCATGAATTCTGAACATTACCCCTGAATTGTGTTTAAAGAAAtcatgaacatttttaaataactatgaaattcagtttgttgttgttgcagattttaaaggagaaatccggtaTGAAATGAACTTGTGtacattagtgttttagtgaaacatgaaaacaagtagaaacatttttgttaaatatctcacctctgttctcccccagcgttctgaaatacagagcttttagctgatgctcccaacaggcttacagtgttagtgataggggcatagagttacccGTGCAAAGGAATCactattttacaccattaacaacaaACTCAGTGGTAGAAATCTGAGAGCCTGACattaaaaacaagaaactaagATCTTTTAAAGAGCACAGAGAGTTTATTAAAtactctgtttattatacaCACAGGACCGTCAGGTAggtgttaaaataaagttacGATCAGTCGAAGAACAAGCACAACATTACAGGCAGGAAAAGGGAACAGACTGCAAAATTGGAAATGCATAAATATTACAGAGATTTTTACTTATTTCCATTCATTTATAATTTTCCTGTGTATGAAGCTGCTTGGAGATTaatgttaatggtgtaaaatagtgatttctttgcatgagtagctctatgcccctatcactgcTATTGtgagcctgttgggagcatcggctaaaagctctgAATTTTGCTATTTGAgaaaagtttgtactcattatcatgtttcactacaacacaAGTCtgtttcacaccagatttcacCTTTAATTCTGTTCAGATTCTGTTGAttgatttgcacattttttgagGTTTACATAAAAAACTTCCTCAAAGTGTTTCAccaacattttataaaatgtgaCATAACTGTGATAATAATGTGACCAacgtttgttttcttgttttcattAATTGTCAAagcaataaacacacagaataacATTCAGTTTAAATGGTGTTATTGCTGTTTTCACTTTATAATGTGGACAGATGAATAAAAATCCTAATACCTGATGAACTTA

Function

symbol description
ldah Predicted to be involved in lipid storage. Predicted to be active in lipid droplet. Orthologous to human LDAH (lipid droplet associated hydrolase).

NR:

description
lipid droplet-associated hydrolase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103775 False 768 TUCP 0.53 5 84729 115363
TU103776 False 774 TUCP 0.53 5 84729 115363
TU103777 False 808 TUCP 0.53 5 84729 115363
TU103778 False 805 TUCP 0.53 5 84729 115363
TU103780 False 802 TUCP 0.53 5 84729 115363
TU103781 False 1852 TUCP 0.38 3 126248 133160
TU103782 False 1955 TUCP 0.40 4 106902 133160
XM_022672521.1 True 2704 mRNA 0.42 8 84719 133303

Neighbor

gene id symbol gene type direction distance location
apob NA coding upstream 8834 52801 ~ 75885 (+)
tpp1 tpp1 coding downstream 29725 163028 ~ 173869 (+)
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding downstream 45103 178406 ~ 189134 (+)
disp2 disp2 coding downstream 188004 321307 ~ 337947 (+)
ccdc32 cunh15orf57,LOC103043985 coding downstream 218850 352153 ~ 354980 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding downstream 225833 359136 ~ 369003 (+)
G76948 LOC103039036 non-coding upstream 36288 43618 ~ 48431 (+)
G76984 NA non-coding downstream 35910 169213 ~ 169503 (+)
G76992 NA non-coding downstream 64568 197871 ~ 203592 (+)
G76995 NA non-coding downstream 89228 222531 ~ 232122 (+)
G76976 NA non-coding downstream 104962 238265 ~ 358113 (+)
G77008 NA non-coding downstream 118707 252010 ~ 252531 (+)
G77059 NA other downstream 386330 519633 ~ 520590 (+)
G77154 NA other downstream 498411 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 749994 883297 ~ 935678 (+)
G77212 NA other downstream 871826 1005129 ~ 1008842 (+)
G77410 NA other downstream 1351367 1484670 ~ 1485050 (+)

Expression


Co-expression Network