G76972



Basic Information


Item Value
gene id G76972
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 123786 ~ 124792 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU103792
GTCTGTAGTTTAGATCCGTCTGTAGTTTAGATCAGTCTGTAGTTTAGATCAGTCTGTAGTTTAGGTCAGTCTGTAGTTTAGATCAGTCTGTAGTTTAGATCAGTCTGGAGTTTAGATCAGTCTGGAGTTTATGTCAGTCTGTAGTTTAGATCAGTCTGTAGTTTAGATCAGTCTGTAGTTTAGATCCGTCTGTAGTTTAGATCAGTCTGGAGTTTAGATCAGTCTGTAGTTTAGATCAGTCTGTAGTTTAGATCAGTCTGTAGTTTAGTGGTGTTGAAGCTGCAGTGTCGGTGGAGGAAAGTGTCGGTGGTGTGGTTTGGTAACCGGGTGCAGGTGTGTGGATGTGTAGATTGggttggaatgctgtgttctgcCAAACCCCCGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU103792 True 385 lncRNA 0.43 2 123786 124792
Loading

Neighbor


gene id symbol gene type direction distance location
apob NA coding upstream 47901 52801 ~ 75885 (+)
tpp1 tpp1 coding downstream 38236 163028 ~ 173869 (+)
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding downstream 53614 178406 ~ 189134 (+)
disp2 disp2 coding downstream 196515 321307 ~ 337947 (+)
ccdc32 cunh15orf57,LOC103043985 coding downstream 227361 352153 ~ 354980 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding downstream 234344 359136 ~ 369003 (+)
G76970 NA non-coding upstream 5016 113419 ~ 118770 (+)
G76969 NA non-coding upstream 6334 113328 ~ 117452 (+)
G76971 NA non-coding upstream 7187 115801 ~ 116599 (+)
G76948 LOC103039036 non-coding upstream 75355 43618 ~ 48431 (+)
G76984 NA non-coding downstream 44421 169213 ~ 169503 (+)
G76992 NA non-coding downstream 73079 197871 ~ 203592 (+)
G76995 NA non-coding downstream 97739 222531 ~ 232122 (+)
G76976 NA non-coding downstream 113473 238265 ~ 358113 (+)
G77008 NA non-coding downstream 127218 252010 ~ 252531 (+)
G77059 NA other downstream 394841 519633 ~ 520590 (+)
G77154 NA other downstream 506922 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 758505 883297 ~ 935678 (+)
G77212 NA other downstream 880337 1005129 ~ 1008842 (+)
G77410 NA other downstream 1359878 1484670 ~ 1485050 (+)

Expression


G76972 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G76972 Expression in each Bioproject

Bar chart with 6 bars.
G76972 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
End of interactive chart.

Co-expression Network