G76976


Basic Information

Item Value
gene id G76976
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 238265 ~ 358113 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103797
GactcgattctgatacatcagctcacagacgcagccttgtgctgatccacatcaccctagaagtgatgaggggaaagagagagagcgccatctactgtactgtacccacccagagagaacaagaccaaccaattgtgctctctcagggctccagcagctgatgtcaagctgcatgactgggattcgaaccggcgatcttctgatcatagtggcagcactttataCTGCTAGAACCTTAAAATGCCCACAGTAAGAAAAGGAAATAAGAATGAGCTGTTCACtgagtttatctgattttaattttggatttggtatcaatattcagaCATAGATCTGGGCTCTCATGGGTTAAACTTCTGGGTAATTAAGTGATGAAGATGTTAGAGCAGATAAATCACTGGATTGTGCTGAACACCAACCATAAATCACTGGAATTGATTACCCCCTTCTCTAGACAACAAGCCAGACCCTAATATGAAGTTGTTTTTTGGATTGTCCTATAATTTCCCAACTTTAACTCATATAATctagtattttaattagttttggTGATCAAATATGCGTTAACTTTTGTGAATGGTCTCAAAACGCTTCCAAATAATGtgacaatatatggacatactTTTATCAGCTACTCTTAACAACTGTTGGTTCTGCTGGACCAGTGAAATACGGACTACATAAACATGCTGTTGTGACCGGTGTTGTAAACAGTCTCTGTGATTCATGCTGATTTCATTTGTATTCCAGCAGCAGttctgaaaaagaaataa
>TU103798
ctcggaggaaagcgcagcgactcggttctgatacatcagctcacagacgcagccttgtgctgatccacatcaccctaggagtgatgaggagaaagagagagcgccatctactgtactgtacccacccagagagagcaagaccaaccaattgtgctctctcagggctccagcagctgatgtcaagctgcatgactgggattcgaaccggcgatcttctgatcatagtggcagcactttataCTGCTAGAACCTTAAAATGCCCACAGTAAGAAAAGGAAATAAGAATGAGCTGTTCACtgagtttatctgattttaattttggatttggtatcaatattcagaCATAGATCTGGGCTCTCATGGGTTAAACTTCTGGGTAATTAAGTGATGAAGATGTTAGAGCAGATAAATCACTGGATTGTGCTGAACACCAACCATAAATCACTGGAATTGATTACCCCCTTCTCTAGACAACAAGCCAGACCCTAATATGAAGTTGTTTTTTGGATTGTCCTATAATTTCCCAACTTTAACTCATATAATctagtattttaattagttttggTGATCAAATATGCGTTAACTTTTGTGAATGGTCTCAAAACGCTTCCAAATAATGtgacaatatatggacatactTTTATCAGCTACTCTTAACAACTGTTGGTTCTGCTGGACCAGTGAAATACGGACTACATAAACATGCTGTTGTGACCGGTGTTGTAAACAGTCTCTGTGATTCATGCTGATTTCATTTGTATTCCAGCAGCAGttctgaaaaagaaataa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103797 False 773 lncRNA 0.40 3 238265 358113
TU103798 True 789 lncRNA 0.41 2 302486 358113

Neighbor

gene id symbol gene type direction distance location
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding upstream 49131 178406 ~ 189134 (+)
tpp1 tpp1 coding upstream 64396 163028 ~ 173869 (+)
apob NA coding upstream 162380 52801 ~ 75885 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding downstream 1023 359136 ~ 369003 (+)
itpka itpka coding downstream 112400 470513 ~ 495668 (+)
LOC103041189 si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552 coding downstream 288786 646899 ~ 651689 (+)
adprhl2 adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508 coding downstream 303426 661539 ~ 666304 (+)
cinp NA coding downstream 309092 667205 ~ 671575 (+)
G76995 NA non-coding upstream 6143 222531 ~ 232122 (+)
G76992 NA non-coding upstream 34673 197871 ~ 203592 (+)
G76984 NA non-coding upstream 68762 169213 ~ 169503 (+)
G76972 NA non-coding upstream 113473 123786 ~ 124792 (+)
G76970 NA non-coding upstream 119495 113419 ~ 118770 (+)
G77033 NA non-coding downstream 24932 383045 ~ 383284 (+)
G77035 NA non-coding downstream 49870 407983 ~ 501997 (+)
G77041 NA non-coding downstream 64963 423076 ~ 482930 (+)
G77049 NA non-coding downstream 99790 457903 ~ 467900 (+)
G77048 ivd,LOC107719458,LOC107733087 non-coding downstream 101155 459268 ~ 465132 (+)
ldah ldah other upstream 104962 84719 ~ 133303 (+)
G77059 NA other downstream 161520 519633 ~ 520590 (+)
G77154 NA other downstream 273601 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 525184 883297 ~ 935678 (+)
G77212 NA other downstream 647016 1005129 ~ 1008842 (+)
G77410 NA other downstream 1126557 1484670 ~ 1485050 (+)

Expression


Co-expression Network