G77008


Basic Information

Item Value
gene id G77008
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 252010 ~ 252531 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU103839
TGAGTGTTTATGGGTCGAGgctggaggaggaggggaaCTGTAAGGCTGTAATGCTCAGTCCCTCGTTtcccttttttatattaaacagtgGAAGAGTTGATTcacagagagcacagagagcacagagagcacagagagcacagagagcaCAGCGCTGCATTAATAAcacctccctcctctctctaaactcaactcaaccgcagatcattaaaaatataaaacaagttAAAACATGTGTGACCCGGAGCATCATCTGTCCTGATCCTGTAATCCTGTAATCGTAAGGGTCAGTCTATACTCCAGCTCTGATCATCTTTAATTATTGatcaacagaaaataaaaacagagatgTTTGAGAAGTTTGAGCTCGTCCAGCCTCGtcctgtaataataataataaatctctGCATCACTTTACTCACCAGCGCTGAACACAGGCTCCCTCTGTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103839 True 450 lncRNA 0.43 2 252010 252531

Neighbor

gene id symbol gene type direction distance location
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding upstream 62876 178406 ~ 189134 (+)
tpp1 tpp1 coding upstream 78141 163028 ~ 173869 (+)
apob NA coding upstream 176125 52801 ~ 75885 (+)
disp2 disp2 coding downstream 68776 321307 ~ 337947 (+)
ccdc32 cunh15orf57,LOC103043985 coding downstream 99622 352153 ~ 354980 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding downstream 106605 359136 ~ 369003 (+)
itpka itpka coding downstream 217982 470513 ~ 495668 (+)
LOC103041189 si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552 coding downstream 394368 646899 ~ 651689 (+)
G76995 NA non-coding upstream 19888 222531 ~ 232122 (+)
G76992 NA non-coding upstream 48418 197871 ~ 203592 (+)
G76984 NA non-coding upstream 82507 169213 ~ 169503 (+)
G76972 NA non-coding upstream 127218 123786 ~ 124792 (+)
G76971 NA non-coding upstream 135411 115801 ~ 116599 (+)
G77033 NA non-coding downstream 130514 383045 ~ 383284 (+)
G77035 NA non-coding downstream 155452 407983 ~ 501997 (+)
G77041 NA non-coding downstream 170545 423076 ~ 482930 (+)
G77049 NA non-coding downstream 205372 457903 ~ 467900 (+)
G77048 ivd,LOC107719458,LOC107733087 non-coding downstream 206737 459268 ~ 465132 (+)
ldah ldah other upstream 118707 84719 ~ 133303 (+)
G77059 NA other downstream 267102 519633 ~ 520590 (+)
G77154 NA other downstream 379183 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 630766 883297 ~ 935678 (+)
G77212 NA other downstream 752598 1005129 ~ 1008842 (+)
G77410 NA other downstream 1232139 1484670 ~ 1485050 (+)

Expression


Co-expression Network