G77137


Basic Information

Item Value
gene id G77137
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 566365 ~ 566655 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104013
tatataatcaagaggaagatggatgatcacaagccatcaaaccaccaaactgaactgcttgaatttttacaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaattaaaactgtgattaaaaaccaaccagggttattccaccaaatattgattatttctgaactcttaaaactttatgaatatgaacttgttttctttgcattatttgaggtctgaaagttctgcatcttttttgttatttc

Function

GO: NA

KEGG:

id description
ko00830 Retinol metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
TU104013 True 291 lncRNA 0.34 1 566365 566655

Neighbor

gene id symbol gene type direction distance location
itpka itpka coding upstream 70697 470513 ~ 495668 (+)
LOC103044274 LOC108425589,LOC108269650,LOC107697665,LOC107719518,LOC107563387 coding upstream 197362 359136 ~ 369003 (+)
ccdc32 cunh15orf57,LOC103043985 coding upstream 211385 352153 ~ 354980 (+)
disp2 disp2 coding upstream 228418 321307 ~ 337947 (+)
degs2 degs2,LOC107697737,LOC107733197,LOC107674056 coding upstream 377231 178406 ~ 189134 (+)
LOC103041189 si:dkey-13p1.4,LOC103041189,LOC108436737,LOC107697687,LOC107674053,LOC107733120,LOC107719509,LOC108269552 coding downstream 80244 646899 ~ 651689 (+)
adprhl2 adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508 coding downstream 94884 661539 ~ 666304 (+)
cinp NA coding downstream 100550 667205 ~ 671575 (+)
nubpl nubpl,LOC107719449,LOC107697759,LOC107561549,LOC107733195,LOC107674123 coding downstream 187584 754239 ~ 761723 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding downstream 209469 776124 ~ 814690 (+)
G77135 NA non-coding upstream 5194 560903 ~ 561171 (+)
G77060 NA non-coding upstream 31761 522310 ~ 534604 (+)
G77054 NA non-coding upstream 36522 516626 ~ 529843 (+)
G77041 NA non-coding upstream 83435 423076 ~ 482930 (+)
G77148 NA non-coding downstream 47356 614011 ~ 621295 (+)
G77163 NA non-coding downstream 91261 657916 ~ 660202 (+)
G77166 NA non-coding downstream 108221 674876 ~ 677225 (+)
G77174 NA non-coding downstream 132267 698922 ~ 760923 (+)
G77191 NA non-coding downstream 193759 760414 ~ 777173 (+)
G77059 NA other upstream 45775 519633 ~ 520590 (+)
ldah ldah other upstream 433062 84719 ~ 133303 (+)
G77154 NA other downstream 65059 631714 ~ 632372 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other downstream 316642 883297 ~ 935678 (+)
G77212 NA other downstream 438474 1005129 ~ 1008842 (+)
G77410 NA other downstream 918015 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 962315 1528970 ~ 1563180 (+)

Expression


Co-expression Network