G77203


Basic Information

Item Value
gene id G77203
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 907806 ~ 908280 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104109
gactgatatttacattgtagattctcactgaagcatcaaaactatgaatgaacacatgtggagttttatgtacttaacaaaaaaggtgaaataactgaaaaaacatgttttatattcttctgtttcttcaaaataaaagcccccctttgctctgattactgctttgcacacacttggcatcattctctcaatgagcttcttcaagaggtggccacctgaaataaaaaaagttttccaacagtcttgaaggaaggaaggagttcccagaggtgtttattagcacttgttgctcctttgtcttcttcactctgtgctccagctcaccccaaacctggatctggattgggttcaggtccggtgactgtggaggttca
>TU104110
cccccctttgctctgattactgctttgcacacacttggcatcattctctcaatgagcttcttcaagaggtggccacctgaaataaaaaaagttttccaacagtcttgaaggaaggaaggagttcccagaggtgtttattagcacttgttgctcctttgtcttcttcactctgtgctccagctcaccccaaacctggatctggattgggttcaggtccggtgactgtggaggttca
>TU104111
cccccctttgctctgattactgctttgcacacacttggcatcattctctcaatgagcttcttcaagaggtggccacctgaaataaaaaaagttttccaacagtcttgaaggaaggaaggagttcccagaggtgtttattagcacttgttgctcctttgtcttcttcactctgtgctccagctcaccccaaacctggatctggattgggttcaggtccggtgactgtggaggttcagctcattttttattaagtacataaaactccacatgtgttcattcatagttttgatgcttcagtgagaatctacaatgtaaatatcagtcatgaaaataaag
>TU104112
gactgatatttacattgtagattctcactgaagcatcaaaactatgaatgaacacatgtggagttttatgtacttaacaaaaaaggtgaaataactgaaaaaacatgttttatattcttctgtttcttcaaaataaaagcccccctttgctctgattactgctttgcacacacttggcatcattctctcaatgagcttcttcaagaggtggccacctgaaataaaaaaagttttccaacagtcttgaaggaaggaaggagttcccagaggtgtttattagcacttgttgctcctttgtcttcttcactctgtgctccagctcaccccaaacctggatctggattgggttcaggtccggtgactgtggaggttcagctcattttttattaagtacataaaactccacatgtgttcattcatagttttgatgcttcagtgagaatctacaatgtaaatatcagtcatgaaaataaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104109 False 374 lncRNA 0.40 1 907806 908179
TU104110 False 235 lncRNA 0.48 1 907945 908179
TU104111 False 336 lncRNA 0.42 1 907945 908280
TU104112 True 475 lncRNA 0.38 1 907806 908280

Neighbor

gene id symbol gene type direction distance location
eef1akmt2 mettl10 coding upstream 69653 834977 ~ 838153 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding upstream 93116 776124 ~ 814690 (+)
nubpl nubpl,LOC107719449,LOC107697759,LOC107561549,LOC107733195,LOC107674123 coding upstream 146083 754239 ~ 761723 (+)
cinp NA coding upstream 236231 667205 ~ 671575 (+)
adprhl2 adprhl2,LOC107697751,LOC107674064,LOC107594801,LOC107719508 coding upstream 241502 661539 ~ 666304 (+)
LOC103042422 LOC107594852 coding downstream 107553 1015833 ~ 1033566 (+)
adam12 LOC108436745,LOC108270250,LOC107752796,LOC107697763,LOC107592760,LOC107733079 coding downstream 130594 1038874 ~ 1179637 (+)
LOC103043042 LOC108436743,LOC108269478,LOC107752797,LOC107733148,LOC107697766 coding downstream 278840 1187120 ~ 1203142 (+)
LOC107197738 ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734 coding downstream 395787 1304067 ~ 1318118 (+)
gcfc2 gcfc2 coding downstream 411139 1319419 ~ 1329088 (+)
G77201 NA non-coding upstream 3820 903418 ~ 903986 (+)
G77200 NA non-coding upstream 4567 903038 ~ 903239 (+)
G77181 NA non-coding upstream 13147 786239 ~ 894659 (+)
G77191 NA non-coding upstream 130633 760414 ~ 777173 (+)
G77174 NA non-coding upstream 146883 698922 ~ 760923 (+)
G77207 NA non-coding downstream 4828 913108 ~ 913660 (+)
G77198 NA non-coding downstream 27968 936248 ~ 937233 (+)
G77214 NA non-coding downstream 57534 965814 ~ 1050942 (+)
G77215 NA non-coding downstream 62271 970551 ~ 977452 (+)
G77245 NA non-coding downstream 330064 1238344 ~ 1238806 (+)
G77154 NA other upstream 275434 631714 ~ 632372 (+)
G77059 NA other upstream 387216 519633 ~ 520590 (+)
ldah ldah other upstream 774503 84719 ~ 133303 (+)
G77212 NA other downstream 96849 1005129 ~ 1008842 (+)
G77410 NA other downstream 576390 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 620690 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 785076 1693356 ~ 1696981 (+)
zfyve19 zfyve19 other downstream 789685 1697965 ~ 1708297 (+)

Expression


Co-expression Network