G77245


Basic Information

Item Value
gene id G77245
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1238344 ~ 1238806 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104164
ccaaattgaaaatctctggaatataatcaagaggaagatggatgatcacaagccatcaaaccaccaaactgaactgcttgaatttttacaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcatgaaaaaaaaactgtgattaaaaaccagggttattccaccaaatattgatttctgaactctaaatttgggagaaatgttgtctgtagtttatagaataaaacaacaatgttcattttactcaaatataaacctataaatagcaaaatcagagaaactgattcagaa

Function

GO: NA

KEGG:

id description
ko00670 One carbon pool by folate

RNA

RNA id representative length rna type GC content exon number start site end site
TU104164 True 332 lncRNA 0.33 2 1238344 1238806

Neighbor

gene id symbol gene type direction distance location
LOC103043042 LOC108436743,LOC108269478,LOC107752797,LOC107733148,LOC107697766 coding upstream 35202 1187120 ~ 1203142 (+)
adam12 LOC108436745,LOC108270250,LOC107752796,LOC107697763,LOC107592760,LOC107733079 coding upstream 58707 1038874 ~ 1179637 (+)
LOC103042422 LOC107594852 coding upstream 204778 1015833 ~ 1033566 (+)
eef1akmt2 mettl10 coding upstream 400191 834977 ~ 838153 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding upstream 423654 776124 ~ 814690 (+)
LOC107197738 ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734 coding downstream 65261 1304067 ~ 1318118 (+)
gcfc2 gcfc2 coding downstream 80613 1319419 ~ 1329088 (+)
LOC103037734 LOC105015678,LOC106588052 coding downstream 231209 1470015 ~ 1479658 (+)
mthfd1 mthfd1,LOC108269612 coding downstream 259316 1498122 ~ 1514730 (+)
plcb2 plcb2 coding downstream 342950 1581756 ~ 1617335 (+)
G77214 NA non-coding upstream 187402 965814 ~ 1050942 (+)
G77215 NA non-coding upstream 260892 970551 ~ 977452 (+)
G77198 NA non-coding upstream 301111 936248 ~ 937233 (+)
G77207 NA non-coding upstream 324684 913108 ~ 913660 (+)
G77203 NA non-coding upstream 330064 907806 ~ 908280 (+)
G77259 NA non-coding downstream 27031 1265837 ~ 1266074 (+)
G77375 NA non-coding downstream 105290 1344096 ~ 1345264 (+)
G77376 NA non-coding downstream 106537 1345343 ~ 1349654 (+)
G77373 NA non-coding downstream 129296 1368102 ~ 1368585 (+)
G77399 LOC103037189,LOC108269635,LOC106588122 non-coding downstream 210018 1448824 ~ 1452208 (+)
G77212 NA other upstream 229502 1005129 ~ 1008842 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other upstream 302666 883297 ~ 935678 (+)
G77154 NA other upstream 605972 631714 ~ 632372 (+)
G77059 NA other upstream 717754 519633 ~ 520590 (+)
ldah ldah other upstream 1105041 84719 ~ 133303 (+)
G77410 NA other downstream 245864 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 290164 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 454550 1693356 ~ 1696981 (+)
zfyve19 zfyve19 other downstream 459159 1697965 ~ 1708297 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 673726 1912532 ~ 2009418 (+)

Expression


Co-expression Network