G77259


Basic Information

Item Value
gene id G77259
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1265837 ~ 1266074 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104180
tcaaataatgcaaagaaaacaagttcatattcataaagttttaagagttcagaaatcaatatttggtggaataaccctggtttttatgcatcttggcatcatgttctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgtaaaaattcaagcagttcagtttggtggtttgatggtttgtgatcatccatcttcctcttgattatattccaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104180 True 238 lncRNA 0.35 1 1265837 1266074

Neighbor

gene id symbol gene type direction distance location
LOC103043042 LOC108436743,LOC108269478,LOC107752797,LOC107733148,LOC107697766 coding upstream 62695 1187120 ~ 1203142 (+)
adam12 LOC108436745,LOC108270250,LOC107752796,LOC107697763,LOC107592760,LOC107733079 coding upstream 86200 1038874 ~ 1179637 (+)
LOC103042422 LOC107594852 coding upstream 232271 1015833 ~ 1033566 (+)
eef1akmt2 mettl10 coding upstream 427684 834977 ~ 838153 (+)
arhgap5 arhgap5,LOC107594795,LOC107733129,LOC107719447,LOC107561551 coding upstream 451147 776124 ~ 814690 (+)
LOC107197738 ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734 coding downstream 37993 1304067 ~ 1318118 (+)
gcfc2 gcfc2 coding downstream 53345 1319419 ~ 1329088 (+)
LOC103037734 LOC105015678,LOC106588052 coding downstream 203941 1470015 ~ 1479658 (+)
mthfd1 mthfd1,LOC108269612 coding downstream 232048 1498122 ~ 1514730 (+)
plcb2 plcb2 coding downstream 315682 1581756 ~ 1617335 (+)
G77245 NA non-coding upstream 27031 1238344 ~ 1238806 (+)
G77214 NA non-coding upstream 214895 965814 ~ 1050942 (+)
G77215 NA non-coding upstream 288385 970551 ~ 977452 (+)
G77198 NA non-coding upstream 328604 936248 ~ 937233 (+)
G77207 NA non-coding upstream 352177 913108 ~ 913660 (+)
G77375 NA non-coding downstream 78022 1344096 ~ 1345264 (+)
G77376 NA non-coding downstream 79269 1345343 ~ 1349654 (+)
G77373 NA non-coding downstream 102028 1368102 ~ 1368585 (+)
G77399 LOC103037189,LOC108269635,LOC106588122 non-coding downstream 182750 1448824 ~ 1452208 (+)
G77402 NA non-coding downstream 197164 1463238 ~ 1464202 (+)
G77212 NA other upstream 256995 1005129 ~ 1008842 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other upstream 330159 883297 ~ 935678 (+)
G77154 NA other upstream 633465 631714 ~ 632372 (+)
G77059 NA other upstream 745247 519633 ~ 520590 (+)
ldah ldah other upstream 1132534 84719 ~ 133303 (+)
G77410 NA other downstream 218596 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 262896 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 427282 1693356 ~ 1696981 (+)
zfyve19 zfyve19 other downstream 431891 1697965 ~ 1708297 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 646458 1912532 ~ 2009418 (+)

Expression


Co-expression Network