G77375


Basic Information

Item Value
gene id G77375
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1344096 ~ 1345264 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104327
CCTCGTATACAAGCAAAATTAcaagcaaaaaaatcagatttcagtctacTTCTAAAGAAGCAGAGCACTACACCCACACGACTCATCCACGTGAGCTCACTGTTGTCTCATTTCCTTTAATTCCTTTCGTCACAATAAAAATAGCCACTAACAAAGACTTCATTTggattacagtatttacagaagCAGACAAAAGAATCAGTTCACTCCTTCACCTCATATTGGCTCTTGTTCCAACCCCAGGAATGCACAAAAACATGGGCCTATTGCTGTCGTTAACTTTACTGAGGTATAGAGGCTACTTCAAAGTATTAGTAGACACGATCAGTTAATAAAAGGTACGATCTTCACGATCATAAACCCCTCAGGAGGAGCATTATTAATTGTtcaaaaaaagtgcacaagatcCATTGACCGGAAGAACGCATCAGCAAACGCACACCATCCTCTAAATTCAGTAGAATCCATGATGAGTTTCCACAGATTCCAGTGACTCTTATTCCGGACAGTCAGCAGTCCGTTCGTGTCCGTGTATGCTCGAGTTTCAGGTGTGGATATGGTCCCTGAGGGGATATCATGGAAGTGAAAGtcagtttttattgtattgagTTATGTGCATGAGTTTTTATAGAGTCCTGATGCAGTATTAGCAGGTTTGCTTGCCAGTCCACAGTCAAATTGTGTGCCGTTATAgtttacatatacagtacccACAATGCCATCCATTATGTACCACTACATCATTACAGCTAATAACGCTCATTATATTTGCAGGTGCcggaaaaaaacacagcaataaCATTACTGTTGGGTTTTGTACGCTAAGTACACATACAGCAGATAAAGCAAACACAGctgttgcataaaaaaaaaaatgtgaggaaaaaaaataaatctgtaaaaaaaaggcaaGAAAATGTACTTCAGATCACAGCTTGTAACCATCTATCCCTTACTGCatattctaatttctaatatatatattatatcattctcaacataaagaaaaaaaatgtctttttgagtttaatttttttaataattttggttCCTTCTATCTTTATATTATCTTTTATCACTTATTAATTTGGCTTGGAAAAGGGGGaagggagaggcagcagacagagaaGGAGGGGCAACAGACAaagggggagaggcagcagatagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104327 True 1169 lncRNA 0.38 1 1344096 1345264

Neighbor

gene id symbol gene type direction distance location
gcfc2 gcfc2 coding upstream 15008 1319419 ~ 1329088 (+)
LOC107197738 ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734 coding upstream 25978 1304067 ~ 1318118 (+)
LOC103043042 LOC108436743,LOC108269478,LOC107752797,LOC107733148,LOC107697766 coding upstream 140954 1187120 ~ 1203142 (+)
adam12 LOC108436745,LOC108270250,LOC107752796,LOC107697763,LOC107592760,LOC107733079 coding upstream 164459 1038874 ~ 1179637 (+)
LOC103042422 LOC107594852 coding upstream 310530 1015833 ~ 1033566 (+)
LOC103037734 LOC105015678,LOC106588052 coding downstream 124751 1470015 ~ 1479658 (+)
mthfd1 mthfd1,LOC108269612 coding downstream 152858 1498122 ~ 1514730 (+)
plcb2 plcb2 coding downstream 236492 1581756 ~ 1617335 (+)
ankrd63 NA coding downstream 299804 1645068 ~ 1647692 (+)
spint1 NA coding downstream 389357 1734621 ~ 1752108 (+)
G77259 NA non-coding upstream 78022 1265837 ~ 1266074 (+)
G77245 NA non-coding upstream 105290 1238344 ~ 1238806 (+)
G77214 NA non-coding upstream 293154 965814 ~ 1050942 (+)
G77215 NA non-coding upstream 366644 970551 ~ 977452 (+)
G77198 NA non-coding upstream 406863 936248 ~ 937233 (+)
G77376 NA non-coding downstream 79 1345343 ~ 1349654 (+)
G77373 NA non-coding downstream 22838 1368102 ~ 1368585 (+)
G77399 LOC103037189,LOC108269635,LOC106588122 non-coding downstream 103560 1448824 ~ 1452208 (+)
G77402 NA non-coding downstream 117974 1463238 ~ 1464202 (+)
G77403 NA non-coding downstream 119642 1464906 ~ 1465270 (+)
G77212 NA other upstream 335254 1005129 ~ 1008842 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other upstream 408418 883297 ~ 935678 (+)
G77154 NA other upstream 711724 631714 ~ 632372 (+)
G77059 NA other upstream 823506 519633 ~ 520590 (+)
ldah ldah other upstream 1210793 84719 ~ 133303 (+)
G77410 NA other downstream 139406 1484670 ~ 1485050 (+)
c9h15orf52 NA other downstream 183706 1528970 ~ 1563180 (+)
G77471 bub1b other downstream 348092 1693356 ~ 1696981 (+)
zfyve19 zfyve19 other downstream 352701 1697965 ~ 1708297 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 567268 1912532 ~ 2009418 (+)

Expression


Co-expression Network