c9h15orf52


Basic Information

Item Value
gene id c9h15orf52
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1528970 ~ 1563180 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104370
CAGGGGAAGAGGGTGGTCAGTGAGCGGGTGGATGGGAACAGTCCTCCAGGCTCTTCTGGAGTAAAATACCCCAGTGAGGAGAAAGACGAGGTGCAGGAAGCGTCAGCAGGTGGAAGAAACTGCGTAAACACCAGGAGAAACACAGGAAACCAGCAAACTGAGGTATCTGACGCCCTTCACCTCTCTGACCTGGACACCCCCACGTCCAGCGAGGAGCAGCTGGAGTACCTGCGCTGGAAGAAAGAACGAGAGGAGATCGATAGAGAGCGAGTGGCGCGCCATAAGAACTCGCAGGGTCAGTGGAGGAGAGCCTGGGACATGGACAAACCCGAGCTTATGTAAGCTGCCGCTGCTGCCTCGCCGCATGAAGCATGCGCTGAATCTGTCGCATCTTTAACCGTCACTAACCGGCATGCCttgctttgatgtttttttgatctgtagtggtttagtttagttttctgtTTCGTTGTTCTTTTGTATGTTGAGCTGTTTGTCTCCTGTTTTTCTAACTGcctctttaagtaaaagatAAACTGCAGTTTATTTTGGAAGCTGA
>XM_022672574.1
CGCTCAGGTACAGGAGTGTATATTGATATGGAGATGATCAGTGAGAGACAGTGATCAGTAAAGATGCTttatctctctgtgtgtctgtgtgttctcggggtaaagcagcagcagcagcagcagcggcggggGTTTAAACGGGTGTTTGTTCAGTCCTGGTGAATTAAAGGCTAAATAATAAATCTGAGAGTATAGTAGatagttagtgtgtgtataacgTTATTTATCTAGCTGTTGGTCTGAGGCCTGGACTCTTCATGGCGCACTATATACCAGGTAGAGTAGAAGGCCCATGGGGTGGCTTTTCTTCAGgcctggtggaggaagaggaggaagaggaggaaaagTACATGGACAGCAATGCAAACTTCCATTTCACCCTTTCTGATTACCTCCAGAGCCTCCATATCTCTGACCAGGTTCATCCAGAGAGCCCCACCGATATGATGCTGCTGAAGAAGGAGCAGAAAGATGCTGAGCTGGATAAGAAGATAGAAGCTCTGCGCAAGAAGAATGAAGCTCTTATGAAGCGGTATCAggaggtggaggaggataAGAAGCGGGCGGAACAGGAGGGAATGGCCCTGCAGAGCCGTAAGGGAAAAGTCGAGGACCTCACCATCACAATCAACAAGTCCCCCACTGAGAAGCGTGTGGTGACTAAGAAGGGTTCAGGAGGTTTGAGCCCTAAAGTTCAGCAGGATCAGGGAGAGGAGAGGCCGGGGAATTTCAGCGGAGGCCGAGGAAAAAGGAGGCATCTGCTGGTCACCATGCCAGGAAATATCAAGGGGAAGAGGGTGGTCAGTGAGCGGGTGGATGGGAACAGTCCTCCAGGCTCTTCTGGAGTAAAATACCCCAGTGAGGAGAAAGACGAGGTGCAGGAAGCGTCAGCAGGTGGAAGAAACTGCGTAAACACCAGGAGAAACACAGGAAACCAGCAAACTGAGGTATCTGACGCCCTTCACCTCTCTGACCTGGACACCCCCACGTCCAGCGAGGAGCAGCTGGAGTACCTGCGCTGGAAGAAAGAACGAGAGGAGATCGATAGAGAGCGAGTGGCGCGCCATAAGAACTCGCAGGGTCAGTGGAGGAGAGCCTGGGACATGGACAAACCCGAGCTTATGTTTTCTGAGAAAGGAGCAGCAGAGAGAGGAGCAGCAGGCAGAGGTGGAAGAAGCAGCAAAAGAGGACATTTAAGATCCTCTCCAGCAGAAAGTCGAGgTAACTCAGCTCGACAtcgggagaaaagagagaagaatgTTCCGGTTGTTGGAAGCAAAGCGAAAGGAAAGGATCGTCTGACAGGCAGAGCCAGGAGATGGGATGCAAAAGTGGAAGAGGATCAGTTACAGgcaTGTCCAGACACCAGTTTAGAGGAGTTTTTGGAGGAGCTGGATGCTCTTTGTGACTCAGAGTTCGACAGCAGCTCTCCACAAACAGAGACCCAGAATGGATTCAGACTATCCGTGGGAGCCTGTGCTGATCTCAGATCAGAGCTTCCAGAACACCACCATCCTCCAGAATCAGCGAACACGGAGTCACCCGGCACTAAAAGCACTGAGAAAAAGGTTCGGTTTTCAGAAGACCTCATTCAGGGAGCTTACGAGAAGAACACTACCAACACCGGCCTGACCGAGACGAAGGCCAGTTCCTTAAAGAGCATGTCACAGACTAAAACAGCAGCTGAggagaaggaggaagcacagCAGACCTCGGATCAGAACCAGGACTGCATCAAAAACACCCAGGAACAAGAGACCAGAGCCATCCTCCCCTCAGAAGATCAGAGCAGAACATCAGGTCAGGAAGATGAGCAGGACACGCCTGTAGAAGAACATCCAGAGACTGAGAGCGGACATAAAGAAGTGGCAGATCACAGCATCGGTTCTCAAAACGCTTGTGACGCCTCCAAACACGATTCCACTGAAGAGGAGCTTTTTCATCCTGTGGAGCGTCTGAAGAGCAGCACCTCCAGAAGCACTGAAGAGCTGATTGACTCCAGTCTCTCAGTTTTGAGTTTGGAATCTGGGGAGCCTCTTCCCGACCACAGCACTAGCACTGAGAAGGCCAGAGAGAACGGGAAGATCGTCTAGACGGAGCCTTTCTTCATCTTCACACCTGAATCGAGACTTAAGACTGAAATCATGAAACCAAAACGAGCAAAATGCCGTTCTGCAGTTTGCCtgtttaagttCATTACAACTCCAGCAGTGGTTCTGAGTGGATCTAACGCTAAATTGGCATACTGATTGTTTTACCTACTGTATTTAACTCTTTCTGCTAATTCATAGGTTGGAGGGGTAACTTGAAACGGTATGTTTTTTTGACTGAGTGATGAGTAGGTGAGGATTGAGGAAACAGGAAGGTAAAGGTAAAGGTAATGTATCTTGTTGAAAAGATCATTTTAAAAGGTTTGGAAGTAAATCTACTTCTGATTTACTGTGTGCCTGACTTTTAACATCAGCCTGGCTTTTGTGGTTTGATGAGTTTGCAAGGAAATTAGGCTAAAAGCACTATACAGCATATTGAATGTCTAACTGAAGTCCTTTGACGCCTGTGTGTTTATGCGAAGGAAGGAGGAGATTCTAAAATTTGCCCCTAAACAGAAGCACACACAGCTTTCCACCTTATCAAGTCACTGGACACCATGCGGAAGCCTCTTTACTTTCCATTAGagagtatatttatttttctaaacacGTTTTCAGACTTGGGGAGGTGGGATTTTGGAGAGAAGACAGTTTAAAAGCAATGTTTACTGCTTTAAAGTACGTTTCTAAGCACTTTATTTTGTAAGAATGTTGATGAAATGTTCCAGTTGTTGAATTTTCACTTGCTAAATGCTGTACGTTGAGACTCAAAACCCCTTTAAGAGTGAACTTTTGACAGCTGACATCTTTTCCAGGTTTTAGTTGCTTCGACTAAATATTGTTCAGATGTCAAAGGTGACAAAAATGCTTTGTGATATATTTGCGCATTCATATTTGCGATATATTCTGACATATAGGCAGAGAACAGCACACTGGATACTACAGTATAATCTATCATCATCCATTTTTTCAGTACTTCTGAACATAATGGAGCATATAGGAGCCATTTGTAGtttaattaccgtatttttcgcattataaggtgcacctaaaatcttaaaaattgtatgtatgacttctaccagtcaggtattaaggagcagtaaagccactccactgaagtacagagttatacaggagattcagtaaagtttctccagcaatgAGACTGGAGCAaagctagcattagctgctaaccacgctaagaaCTATCTCTTTTGCCGTCCAGAGGTGAGAGTTATCGGACTGTAGGCCACTggtaaccccggctagcactgttgtagcagcattagcattgcccgctaaccatgctaagcgctagctcttttattgttcagagttgagtatatcagactgtagtctgcatgtttaccatgtttaaaacaagctacgcggGACGAAGCGCTAGCTGATATCGCCTTGGctaactggaacactcagggttcctcagtgtagcgctgttgggtggcattagaatgctaatgctaatgctccagccttag
>XM_022672575.1
agagagagagagagagagagagggacaaagTGAGCGTGTGTATGTGCTGCGACTAAGTGGGCCGCTGATGTGAAATTTGTTAGCAGAGGgatactctctctttctgtctctttctctctctttccctgtctctctctttttatctgtctctcCCTTCGTTCGTCGGAGGTTCTGGCTCGCAGCCTGCCGGGGGTTTCATTAGTAATCgaggcatgcacacacactccatgCAGTTCACTGTGCCTTCTCGGCTGCCGTGCGTTTGGAAGCAACCCAGGTTTTGCCGCTGACATGGACCGAGATAGCCCCACCGATATGATGCTGCTGAAGAAGGAGCAGAAAGATGCTGAGCTGGATAAGAAGATAGAAGCTCTGCGCAAGAAGAATGAAGCTCTTATGAAGCGGTATCAggaggtggaggaggataAGAAGCGGGCGGAACAGGAGGGAATGGCCCTGCAGAGCCGTAAGGGAAAAGTCGAGGACCTCACCATCACAATCAACAAGTCCCCCACTGAGAAGCGTGTGGTGACTAAGAAGGGTTCAGGAGGTTTGAGCCCTAAAGTTCAGCAGGATCAGGGAGAGGAGAGGCCGGGGAATTTCAGCGGAGGCCGAGGAAAAAGGAGGCATCTGCTGGTCACCATGCCAGGAAATATCAAGGGGAAGAGGGTGGTCAGTGAGCGGGTGGATGGGAACAGTCCTCCAGGCTCTTCTGGAGTAAAATACCCCAGTGAGGAGAAAGACGAGGTGCAGGAAGCGTCAGCAGGTGGAAGAAACTGCGTAAACACCAGGAGAAACACAGGAAACCAGCAAACTGAGGTATCTGACGCCCTTCACCTCTCTGACCTGGACACCCCCACGTCCAGCGAGGAGCAGCTGGAGTACCTGCGCTGGAAGAAAGAACGAGAGGAGATCGATAGAGAGCGAGTGGCGCGCCATAAGAACTCGCAGGGTCAGTGGAGGAGAGCCTGGGACATGGACAAACCCGAGCTTATGTTTTCTGAGAAAGGAGCAGCAGAGAGAGGAGCAGCAGGCAGAGGTGGAAGAAGCAGCAAAAGAGGACATTTAAGATCCTCTCCAGCAGAAAGTCGAGgTAACTCAGCTCGACAtcgggagaaaagagagaagaatgTTCCGGTTGTTGGAAGCAAAGCGAAAGGAAAGGATCGTCTGACAGGCAGAGCCAGGAGATGGGATGCAAAAGTGGAAGAGGATCAGTTACAGgcaTGTCCAGACACCAGTTTAGAGGAGTTTTTGGAGGAGCTGGATGCTCTTTGTGACTCAGAGTTCGACAGCAGCTCTCCACAAACAGAGACCCAGAATGGATTCAGACTATCCGTGGGAGCCTGTGCTGATCTCAGATCAGAGCTTCCAGAACACCACCATCCTCCAGAATCAGCGAACACGGAGTCACCCGGCACTAAAAGCACTGAGAAAAAGGTTCGGTTTTCAGAAGACCTCATTCAGGGAGCTTACGAGAAGAACACTACCAACACCGGCCTGACCGAGACGAAGGCCAGTTCCTTAAAGAGCATGTCACAGACTAAAACAGCAGCTGAggagaaggaggaagcacagCAGACCTCGGATCAGAACCAGGACTGCATCAAAAACACCCAGGAACAAGAGACCAGAGCCATCCTCCCCTCAGAAGATCAGAGCAGAACATCAGGTCAGGAAGATGAGCAGGACACGCCTGTAGAAGAACATCCAGAGACTGAGAGCGGACATAAAGAAGTGGCAGATCACAGCATCGGTTCTCAAAACGCTTGTGACGCCTCCAAACACGATTCCACTGAAGAGGAGCTTTTTCATCCTGTGGAGCGTCTGAAGAGCAGCACCTCCAGAAGCACTGAAGAGCTGATTGACTCCAGTCTCTCAGTTTTGAGTTTGGAATCTGGGGAGCCTCTTCCCGACCACAGCACTAGCACTGAGAAGGCCAGAGAGAACGGGAAGATCGTCTAGACGGAGCCTTTCTTCATCTTCACACCTGAATCGAGACTTAAGACTGAAATCATGAAACCAAAACGAGCAAAATGCCGTTCTGCAGTTTGCCtgtttaagttCATTACAACTCCAGCAGTGGTTCTGAGTGGATCTAACGCTAAATTGGCATACTGATTGTTTTACCTACTGTATTTAACTCTTTCTGCTAATTCATAGGTTGGAGGGGTAACTTGAAACGGTATGTTTTTTTGACTGAGTGATGAGTAGGTGAGGATTGAGGAAACAGGAAGGTAAAGGTAAAGGTAATGTATCTTGTTGAAAAGATCATTTTAAAAGGTTTGGAAGTAAATCTACTTCTGATTTACTGTGTGCCTGACTTTTAACATCAGCCTGGCTTTTGTGGTTTGATGAGTTTGCAAGGAAATTAGGCTAAAAGCACTATACAGCATATTGAATGTCTAACTGAAGTCCTTTGACGCCTGTGTGTTTATGCGAAGGAAGGAGGAGATTCTAAAATTTGCCCCTAAACAGAAGCACACACAGCTTTCCACCTTATCAAGTCACTGGACACCATGCGGAAGCCTCTTTACTTTCCATTAGagagtatatttatttttctaaacacGTTTTCAGACTTGGGGAGGTGGGATTTTGGAGAGAAGACAGTTTAAAAGCAATGTTTACTGCTTTAAAGTACGTTTCTAAGCACTTTATTTTGTAAGAATGTTGATGAAATGTTCCAGTTGTTGAATTTTCACTTGCTAAATGCTGTACGTTGAGACTCAAAACCCCTTTAAGAGTGAACTTTTGACAGCTGACATCTTTTCCAGGTTTTAGTTGCTTCGACTAAATATTGTTCAGATGTCAAAGGTGACAAAAATGCTTTGTGATATATTTGCGCATTCATATTTGCGATATATTCTGACATATAGGCAGAGAACAGCACACTGGATACTACAGTATAATCTATCATCATCCATTTTTTCAGTACTTCTGAACATAATGGAGCATATAGGAGCCATTTGTAGtttaattaccgtatttttcgcattataaggtgcacctaaaatcttaaaaattgtatgtatgacttctaccagtcaggtattaaggagcagtaaagccactccactgaagtacagagttatacaggagattcagtaaagtttctccagcaatgAGACTGGAGCAaagctagcattagctgctaaccacgctaagaaCTATCTCTTTTGCCGTCCAGAGGTGAGAGTTATCGGACTGTAGGCCACTggtaaccccggctagcactgttgtagcagcattagcattgcccgctaaccatgctaagcgctagctcttttattgttcagagttgagtatatcagactgtagtctgcatgtttaccatgtttaaaacaagctacgcggGACGAAGCGCTAGCTGATATCGCCTTGGctaactggaacactcagggttcctcagtgtagcgctgttgggtggcattagaatgctaatgctaatgctccagccttag

Function

GO: NA

KEGG:

id description
ko03460 Fanconi anemia pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU104370 False 559 lncRNA 0.51 2 1543202 1551676
XM_022672574.1 True 3592 mRNA 0.46 15 1528970 1563180
XM_022672575.1 False 3464 mRNA 0.47 14 1532290 1563180

Neighbor

gene id symbol gene type direction distance location
mthfd1 mthfd1,LOC108269612 coding upstream 14240 1498122 ~ 1514730 (+)
LOC103037734 LOC105015678,LOC106588052 coding upstream 49312 1470015 ~ 1479658 (+)
gcfc2 gcfc2 coding upstream 199882 1319419 ~ 1329088 (+)
LOC107197738 ywhaqb,LOC108436740,LOC107733143,LOC107752793,LOC107592764,LOC107697768,LOC105896734 coding upstream 210852 1304067 ~ 1318118 (+)
LOC103043042 LOC108436743,LOC108269478,LOC107752797,LOC107733148,LOC107697766 coding upstream 325828 1187120 ~ 1203142 (+)
plcb2 plcb2 coding downstream 18576 1581756 ~ 1617335 (+)
ankrd63 NA coding downstream 81888 1645068 ~ 1647692 (+)
spint1 NA coding downstream 171441 1734621 ~ 1752108 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding downstream 242767 1805947 ~ 1831095 (+)
LOC107197725 LOC108430641,LOC108269631 coding downstream 273609 1836789 ~ 1854878 (+)
G77396 NA non-coding upstream 8975 1517762 ~ 1519995 (+)
G77413 NA non-coding upstream 34535 1494160 ~ 1494435 (+)
G77411 NA non-coding upstream 42649 1485833 ~ 1486321 (+)
G77408 NA non-coding upstream 45695 1480821 ~ 1483275 (+)
G77403 NA non-coding upstream 63700 1464906 ~ 1465270 (+)
G77447 NA non-coding downstream 15097 1578277 ~ 1618327 (+)
G77457 NA non-coding downstream 90832 1654012 ~ 1655515 (+)
G77464 NA non-coding downstream 131984 1695164 ~ 1756066 (+)
G77484 NA non-coding downstream 193984 1757164 ~ 1771913 (+)
G77493 NA non-coding downstream 303915 1867095 ~ 1869007 (+)
G77410 NA other upstream 43920 1484670 ~ 1485050 (+)
G77212 NA other upstream 520128 1005129 ~ 1008842 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other upstream 593292 883297 ~ 935678 (+)
G77154 NA other upstream 896598 631714 ~ 632372 (+)
G77059 NA other upstream 1008380 519633 ~ 520590 (+)
G77471 bub1b other downstream 130176 1693356 ~ 1696981 (+)
zfyve19 zfyve19 other downstream 134785 1697965 ~ 1708297 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 349352 1912532 ~ 2009418 (+)
LOC103031026 NA other downstream 895265 2458445 ~ 2464321 (+)
G77722 NA other downstream 1336954 2900134 ~ 2978094 (+)

Expression


Co-expression Network