zfyve19 (zfyve19)


Basic Information

Item Value
gene id zfyve19
gene name zfyve19
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 1697965 ~ 1708297 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104479
GTAGCTACAGTAGGACCTAGGCTGAAATGTCTGCATTTTCAGACCTCGCTAGtggtttaaatgttaatttggtgataattaatataaataaatgtgaatattagtgaataatagttaCATTTATGTAGCTCGTTACGGCTTATGTTCTCTGAActgtttgtttataaatgtgGACAGTCTTTTCAGTGTAACTTAACGTTTAATCAGATATAGTAGCTTATTAATTATCAGCTATGAATAACCGCTGTTATGGCTGTGCGTCAAAGTTCACTCTCTTCAAGAAAGAGATGGGCTGTAAAAACTGCAGCCGCTCGTTCTGTTCAGGCTGTCTGGAGTTCAGTGCTCTGGTGCCCCGGTTCGGTAACACTCAGCAGAAGGTGTGCAGGCAGTGCCACGGGAACCTCACCAGtaatggAATACAGAATGATGCTGCAAGATGGTCTCCACCTGAAAACTATAAAAAGTaagattttgaaaaaaaaaaaatatgaatgagTTCAGTATAACTAAAATTCACAAAAAGCCACTTTTGCCGCCTTTTGTCtgtgtcgtttaaatagcacAGGCGCATGTGGATATGTATGAATAATTGTGAGCAAGAACAGAAATCCTATCGTCCCcccgccatcagcagccggagcactgagagagcacaactgctcttgctct
>TU104480
GTAGCTACAGTAGGACCTAGGCTGAAATGTCTGCATTTTCAGACCTCGCTAGtggtttaaatgttaatttggtgataattaatataaataaatgtgaatattagtgaataatagttaCATTTATGTAGCTCGTTACGGCTTATGTTCTCTGAActgtttgtttataaatgtgGACAGTCTTTTCAGTGTAACTTAACGTTTAATCAGATATAGTAGCTTATTAATTATCAGCTATGAATAACCGCTGTTATGGCTGTGCGTCAAAGTTCACTCTCTTCAAGAAAGAGATGGGCTGTAAAAACTGCAGCCGCTCGTTCTGTTCAGGCTGTCTGGAGTTCAGTGCTCTGGTGCCCCGGTTCGGTAACACTCAGCAGAAGGTGTGCAGGCAGTGCCACGGGAACCTCACCAGtaatggAATACAGAATGATGCTGCAAGATGGTCTCCACCTGAAAACTATAAAAAcacAGGCGCATGTGGATATGTATGAATAATTGTGAGCAAGAACAGAAATCCTATCGTCCCcccgccatcagcagccggagcactgagagagcacaactgctcttgctct
>TU104481
GTAGCTACAGTAGGACCTAGGCTGAAATGTCTGCATTTTCAGACCTCGCTAGtggtttaaatgttaatttggtgataattaatataaataaatgtgaatattagtgaataatagttaCATTTATGTAGCTCGTTACGGCTTATGTTCTCTGAActgtttgtttataaatgtgGACAGTCTTTTCAGTGTAACTTAACGTTTAATCAGATATAGTAGCTTATTAATTATCAGCTATGAATAACCGCTGTTATGGCTGTGCGTCAAAGTTCACTCTCTTCAAGAAAGAGATGGGCTGTAAAAACTGCAGCCGCTCGTTCTGTTCAGGCTGTCTGGAGTTCAGTGCTCTGGTGCCCCGGTTCGGTAACACTCAGCAGAAGGTGTGCAGGCAGTGCCACGGGAACCTCACCAGtaatggAATACAGAATGATGCTGCAAGATGGTCTCCACCTGAAAACTATAAAAACCACTTTTGCCGCCTTTTGTCtgtgtcgtttaaatagcacAGGCGCATGTGGATATGTATGAATAATTGTGAGCAAGAACAGAAATCCTATCGTCCCcccgccatcagcagccggagcactgagagagcacaactgctcttgctct
>XM_022672452.1
tgtgttttccttccTTAAACATGTAGCTACAGTAGGACCTAGGCTGAAATGTCTGCATTTTCAGACCTCGCTAGtggtttaaatgttaatttggtgataattaatataaataaatgtgaatattagtgaataatagttaCATTTATGTAGCTCGTTACGGCTTATGTTCTCTGAActgtttgtttataaatgtgGACAGTCTTTTCAGTGTAACTTAACGTTTAATCAGATATAGTAGCTTATTAATTATCAGCTATGAATAACCGCTGTTATGGCTGTGCGTCAAAGTTCACTCTCTTCAAGAAAGAGATGGGCTGTAAAAACTGCAGCCGCTCGTTCTGTTCAGGCTGTCTGGAGTTCAGTGCTCTGGTGCCCCGGTTCGGTAACACTCAGCAGAAGGTGTGCAGGCAGTGCCACGGGAACCTCACCAGtaatggAATACAGAATGATGCTGCAAGATGGTCTCCACCTGAAAACTATAAAAAATGTGAGACATGTATGCACTCAGAATGGTGTTTCTGCTTTGCGCAGGTTCATCGGCCACCTGATACCAGGACTCAGACTGAACAGGCCAGTGACTTACTCACGCAGATGACTGAGGAAGTTGCCATTGACAACCAGCATTCTCCAGAGGCTAATAACCCAGAGGCTCCTGCCAGTCCTCTGAACGATCTCAACAAGCTGGAGTCCGGGACGGAGAACCTGGAAGATGAGCAGCTGTCCCTGAagaagctggaggaggagaagagtcGTCTCATGGCTGAGGCCATGGATGAGCTGAAATGTGAGGAGCAGAATCAGGAGCAGCTTCTTCAAATGGCCAAAAGGCTGGCTGTGCTGCAGGGACGAGACCCGGCCAAAGttactgTGGCAGACATCCAGCATCCTGAGAGTGATGAAGAAAATGAGGAGGAAGCGATTGGCAGAGTTATAAAAAGGCTGTCAGAAGAAGCTGCTTTAGACGAGGCCAGTGGATATAACATCCCTCCAGAGCGAAGCGGGCCAGAAAATAAGGAACCGTCCAAACCCAAGAAAACACAGTTTCCAGCTCAGTCATCTAAATCCAGACCTTCTGCTACTGCGTTCGTGAGGCAGAGCTCAGACAGTGAGGAGGGTGATGATGAGGAAGAGCTGCCGTGGTGCTGCATCTGCAACCAGAACGCCACCATTCGCTGCCACACGTGTGACCGGGACCTGTTCTGCAGCCGCTGCTTTAGGGAAGGCCATGACAAATATGACAGAAAAGAACACCATACATCCAGTTACAGCGCCCCCAAAAAAGCCAAGAAGAAGACATGACCATCAAAAAGTGTTGATATTGTCTGTGTGTAACAGTGAACTTgtacagtagtacagtagtCAAATCCAAACCCAAGGTGAACACGGTTTCTCATTGACGAGACTAGCCAAAGTAGGTTgctaatttacttaaatatataagcGTAGTGACTCAGAGGTGTCCAGGGTAATTCATAATCATCTAACCACTTGCAGTAGtatactaaatataatataatgtatatttttttccttttggttGGATTTTTTAATATGAAAAAGCAAGAAGCAAGAATCAAACTGATTATACGTAAGgtcaaaatatacatacagcataaataatatgtataaaaatgcatatttaataaattttctTGCCAGAAGATAGCTGATCTACGGCCGCAGCACATCAgtaccaatattacacattatagcacgaacctccattaaaaaaacattattaaaaaaagtgttctaaaccgcataaaatttaaatgtaaaaataagctCCTGTTTTGCCTCGTCTGCTCTTTCCAGTGCAGTGAGCggagctaagctactgtttcttTGGCTGGTAAACTTTTGCagtggctggttcatggtctattctgatggaaaaATGATGGGCAAAAAAATTTAACGGACACAGggtctgaaattattaagtaataatCAATGTggcttttgtgtatttttgactaTGTATGAATGTGTAATGCGTTGGTTCAGCTTGTCAGCACTACTATTATCTGATACTTTCACCATGAAATAGATTTGTGAGTCATACTGACTTtccataattattaaattaaaaataaagaaagaaaatgatttgTTTTCACTTAATAAGACAAACAGATTTCCTTTACTTCTGCTTAGCCATGCTGTGGTGCTTTCTAAATATTGTGGCCAAAGAAATGTTTTACTATTGGTAATTAAAGCAGTGCACGAGAGTCGTTTATCTTAaaa

Function

symbol description
zfyve19 Predicted to enable phosphatidylinositol-3-phosphate binding activity. Predicted to be involved in abscission and mitotic cytokinesis checkpoint signaling. Predicted to be active in centrosome; cleavage furrow; and midbody. Orthologous to human ZFYVE19 (zinc finger FYVE-type containing 19).

NR:

description
abscission/NoCut checkpoint regulator

GO: NA

KEGG:

id description
K24778 ZFYVE19, ANCHR; abscission/NoCut checkpoint regulator

RNA

RNA id representative length rna type GC content exon number start site end site
TU104479 False 669 lncRNA 0.40 3 1697987 1698898
TU104480 False 572 lncRNA 0.42 4 1697987 1698898
TU104481 False 609 lncRNA 0.42 4 1697987 1698898
XM_022672452.1 True 2247 mRNA 0.41 9 1697965 1708297

Neighbor

gene id symbol gene type direction distance location
ankrd63 NA coding upstream 50273 1645068 ~ 1647692 (+)
plcb2 plcb2 coding upstream 80630 1581756 ~ 1617335 (+)
mthfd1 mthfd1,LOC108269612 coding upstream 183235 1498122 ~ 1514730 (+)
LOC103037734 LOC105015678,LOC106588052 coding upstream 218307 1470015 ~ 1479658 (+)
gcfc2 gcfc2 coding upstream 368877 1319419 ~ 1329088 (+)
spint1 NA coding downstream 26324 1734621 ~ 1752108 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding downstream 97650 1805947 ~ 1831095 (+)
LOC107197725 LOC108430641,LOC108269631 coding downstream 128492 1836789 ~ 1854878 (+)
dnajc17 dnajc17 coding downstream 379316 2087613 ~ 2146276 (+)
fsip1 NA coding downstream 538754 2247051 ~ 2312662 (+)
G77457 NA non-coding upstream 42450 1654012 ~ 1655515 (+)
G77447 NA non-coding upstream 79638 1578277 ~ 1618327 (+)
G77396 NA non-coding upstream 177970 1517762 ~ 1519995 (+)
G77413 NA non-coding upstream 203530 1494160 ~ 1494435 (+)
G77411 NA non-coding upstream 211644 1485833 ~ 1486321 (+)
G77484 NA non-coding downstream 48867 1757164 ~ 1771913 (+)
G77493 NA non-coding downstream 158798 1867095 ~ 1869007 (+)
G77510 NA non-coding downstream 318393 2026690 ~ 2030616 (+)
LOC103031311 inf2,LOC107678755 non-coding downstream 352816 2061113 ~ 2066854 (+)
G77531 NA non-coding downstream 476572 2184869 ~ 2185952 (+)
G77471 bub1b other upstream 984 1693356 ~ 1696981 (+)
c9h15orf52 NA other upstream 134785 1528970 ~ 1563180 (+)
G77410 NA other upstream 212915 1484670 ~ 1485050 (+)
G77212 NA other upstream 689123 1005129 ~ 1008842 (+)
LOC103037215 fam196ab,LOC108436749,LOC108269663,LOC107561539,LOC107733200,LOC107674119 other upstream 762287 883297 ~ 935678 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other downstream 204235 1912532 ~ 2009418 (+)
LOC103031026 NA other downstream 750148 2458445 ~ 2464321 (+)
G77722 NA other downstream 1191837 2900134 ~ 2978094 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 1613788 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 2057483 3765780 ~ 3824872 (+)

Expression


Co-expression Network