G77531


Basic Information

Item Value
gene id G77531
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 2184869 ~ 2185952 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104557
CTCTAAGTACacattatttactcagtaagtactcagaaacaacagggagcgtctggctgtattatgtagtgtacagtgtctTACttttcttactctgtaagtaacTACACAGTATAATAACGCATTACCGACGTTtttgtgttaaatatatatataataaacggTGTTTTGtctatttaataattaaagctCGTTCTTGTCCTttttaacactatttttttttcaatgcaaaGTGTGCCTCTGAGATTTGATTTTGCTCACCGTCGCGTGAGGTCACTCAGCGATTACGCAAAAGTTATTTTAAGAGTGATGCAATCTGCCCAAAGCAATGTGTCACCCCTGAAGTAAATACTGCAAGAGCGACACTTGCTTGGCATTTTGCTCGGCATCGGGGTAGtggattattttattacttttaaatgaGACAAACCTGATGGAAAACTTTATCtactaaaatagaaaatagaaggGGTTGTGCAaactttctttttaagaaaGTTCTCAAAACCGCTCAGTctgaaaaacctaaaaaaacacaaaaatgctgGTGTTCTTTTAGTTTAAACAGAAGTAAAAGGAggagaaaacattttaaaactaaaaagacGCACAGCTATACAGGACAGTTGAGCACTCAACGCTTTTATTAcctttttatctgtttaaaagTTGTTCAAGcatcttatatttatatattctactTAGGACTTACTTAACAAATGTCCGTGCAATAACATTTGCCGatatgtctatagtgtaagtgattatgtgtatttttattgtgtgtattctttatactgtaaagtttaaaaatctgtatattttattttatgttatttattttattttattattctgcttgttgtaaatactgttctCTGCCCAATTCTAGGaacctgcacccaagtttttccaCTCaaatgtacacctgtactctgtgacctgacaataaaaatcttgaatcttgaataaatacatttggaaCACTGCGTTTTGATTCAATTATTAGAAAATGCAATGTGGATGCTCTTCATAATAAGGTTGATTAATAACAGATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104557 True 1059 lncRNA 0.33 2 2184869 2185952

Neighbor

gene id symbol gene type direction distance location
dnajc17 dnajc17 coding upstream 38593 2087613 ~ 2146276 (+)
LOC107197725 LOC108430641,LOC108269631 coding upstream 329991 1836789 ~ 1854878 (+)
LOC103033947 LOC107560184,LOC107678711,LOC107726575 coding upstream 353774 1805947 ~ 1831095 (+)
spint1 NA coding upstream 432761 1734621 ~ 1752108 (+)
ankrd63 NA coding upstream 537177 1645068 ~ 1647692 (+)
fsip1 NA coding downstream 61099 2247051 ~ 2312662 (+)
LOC103026471 LOC100304858 coding downstream 279358 2465310 ~ 2468562 (+)
LOC103026149 LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC107743909 coding downstream 285446 2471398 ~ 2474791 (+)
LOC103030398 LOC108430666,LOC106610840,LOC105908184,LOC108270264 coding downstream 574718 2760670 ~ 2864439 (+)
eif2ak4 eif2ak4,LOC107673787 coding downstream 722657 2908609 ~ 2957430 (+)
LOC103031311 inf2,LOC107678755 non-coding upstream 118015 2061113 ~ 2066854 (+)
G77510 NA non-coding upstream 154253 2026690 ~ 2030616 (+)
G77493 NA non-coding upstream 315862 1867095 ~ 1869007 (+)
G77484 NA non-coding upstream 412956 1757164 ~ 1771913 (+)
G77464 NA non-coding upstream 428803 1695164 ~ 1756066 (+)
G77532 NA non-coding downstream 4370 2190322 ~ 2190664 (+)
G77534 NA non-coding downstream 11058 2197010 ~ 2290008 (+)
G77544 NA non-coding downstream 76034 2261986 ~ 2303830 (+)
G77533 NA non-coding downstream 107337 2293289 ~ 2317480 (+)
G77559 thbs1,LOC107668245,LOC107756566,LOC102310807,LOC101487021,LOC102776654 non-coding downstream 134263 2320215 ~ 2321005 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other upstream 175451 1912532 ~ 2009418 (+)
zfyve19 zfyve19 other upstream 476572 1697965 ~ 1708297 (+)
G77471 bub1b other upstream 487888 1693356 ~ 1696981 (+)
c9h15orf52 NA other upstream 621689 1528970 ~ 1563180 (+)
G77410 NA other upstream 699819 1484670 ~ 1485050 (+)
LOC103031026 NA other downstream 272493 2458445 ~ 2464321 (+)
G77722 NA other downstream 714182 2900134 ~ 2978094 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 1136133 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 1579828 3765780 ~ 3824872 (+)
G78111 pole2 other downstream 2103555 4289507 ~ 4298184 (+)

Expression


Co-expression Network