G77808


Basic Information

Item Value
gene id G77808
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 3220621 ~ 3297442 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU104933
gggggggtgctggagcctatcccagccggcatcgggcggaaggcaggatacaccctggacaggccgccaatccatcgcagggcagacagacacagacagacacacagacacattcactcacacactcacacctaaggggcaatttcaaccaagctccaattagcctgaacgtgccgtctttggactgtgggaggaaaccggagaacccggaggaaacccacgcagacacggggagaacgtgcaaactccacacagaaagacccgggacgccccagccgggaatcgaacccaggccgtcttgctgtgaggcggaagtgctacccactgcgccactgtGCCGCCCTAGacatatatatatatatatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104933 True 367 lncRNA 0.58 2 3220621 3297442

Neighbor

gene id symbol gene type direction distance location
eif2ak4 eif2ak4,LOC107673787 coding upstream 263191 2908609 ~ 2957430 (+)
LOC103030398 LOC108430666,LOC106610840,LOC105908184,LOC108270264 coding upstream 356182 2760670 ~ 2864439 (+)
LOC103026149 LOC108430664,LOC108269450,LOC107567345,LOC107678748,LOC107743909 coding upstream 745830 2471398 ~ 2474791 (+)
LOC103026471 LOC100304858 coding upstream 752059 2465310 ~ 2468562 (+)
fsip1 NA coding upstream 907959 2247051 ~ 2312662 (+)
rcor1 rcor1,LOC107719500,LOC107590914,LOC107733187 coding downstream 12376 3309818 ~ 3324750 (+)
LOC103028495 ehd4,LOC108430677,LOC108270320,LOC107697720,LOC107694734,LOC107582305,LOC107719481 coding downstream 68300 3365742 ~ 3393158 (+)
LOC103028182 sptbn5 coding downstream 99017 3396459 ~ 3475761 (+)
trnav-aac_2 NA coding downstream 118726 3416168 ~ 3416240 (+)
trnav-aac_3 NA coding downstream 119397 3416839 ~ 3416911 (+)
G77799 NA non-coding upstream 7756 3212557 ~ 3212865 (+)
G77792 NA non-coding upstream 14407 3197217 ~ 3206214 (+)
G77724 NA non-coding upstream 233911 2950074 ~ 2986710 (+)
G77727 NA non-coding upstream 253520 2964050 ~ 2967101 (+)
G77721 NA non-coding upstream 324987 2894872 ~ 2895634 (+)
G77817 NA non-coding downstream 96938 3394380 ~ 3394876 (+)
G77847 NA non-coding downstream 244810 3542252 ~ 3549615 (+)
G77961 hectd1,LOC107694830 non-coding downstream 619362 3916804 ~ 3921829 (+)
G78053 NA non-coding downstream 715308 4012750 ~ 4013009 (+)
G78055 NA non-coding downstream 734821 4032263 ~ 4032562 (+)
G77722 NA other upstream 242527 2900134 ~ 2978094 (+)
LOC103031026 NA other upstream 756300 2458445 ~ 2464321 (+)
LOC103033080 akt1,zbtb42,LOC107716055,LOC106610857,LOC106582697 other upstream 1211203 1912532 ~ 2009418 (+)
zfyve19 zfyve19 other upstream 1512324 1697965 ~ 1708297 (+)
G77471 bub1b other upstream 1523640 1693356 ~ 1696981 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other downstream 24643 3322085 ~ 3359744 (+)
g2e3 g2e3 other downstream 468338 3765780 ~ 3824872 (+)
G78111 pole2 other downstream 992065 4289507 ~ 4298184 (+)
LOC103025550 qkia,LOC108413473,LOC107721620,LOC107590898,LOC107697705,LOC103376478,LOC108269894 other downstream 2154673 5452115 ~ 5530055 (+)
LOC103024862 LOC108430185 other downstream 3559912 6857354 ~ 6872405 (+)

Expression


Co-expression Network