G78426


Basic Information

Item Value
gene id G78426
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 6749685 ~ 6750310 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU105709
ctctttgaagagctctgtcctcaggagtttattaaagatagtgagagattctcctgatctggtagtagaaggtagttagttagaggtgttaggagagtaagtgctctttgaagagctctgtcttcaggagtctcttaaagatagcgagagattctcctgatctggtagtagaaggtagtttgttccaccattggggaactctgtatgagaacagt

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU105709 True 215 lncRNA 0.42 2 6749685 6750310

Neighbor

gene id symbol gene type direction distance location
mrps5 mrps5 coding upstream 66572 6627993 ~ 6683113 (+)
pacrg pacrg,LOC107583491,LOC107695182,LOC107697704,LOC107590953 coding upstream 1308951 5345136 ~ 5440734 (+)
ptafr NA coding upstream 1459919 5282014 ~ 5289766 (+)
kdm1a kdm1a coding upstream 1547244 5179637 ~ 5202441 (+)
LOC103044998 LOC103044998 coding upstream 2089983 4650154 ~ 4659702 (+)
LOC103028352 ttbk1b,LOC108430218,LOC107583645,LOC107670856,LOC107553314,LOC107689778 coding downstream 23416 6773726 ~ 6826064 (+)
LOC103028659 NA coding downstream 83275 6833585 ~ 6850452 (+)
LOC103025489 NA coding downstream 122253 6872563 ~ 6884096 (+)
LOC103028981 NA coding downstream 135805 6886115 ~ 6894577 (+)
hhat hhat coding downstream 224605 6974915 ~ 7073508 (+)
G78425 NA non-coding upstream 1149 6747979 ~ 6748536 (+)
G78416 NA non-coding upstream 33497 6713456 ~ 6716188 (+)
G78414 NA non-coding upstream 40857 6708536 ~ 6708828 (+)
G78409 NA non-coding upstream 75395 6673803 ~ 6674290 (+)
G78408 NA non-coding upstream 121943 6624701 ~ 6627742 (+)
G78471 ttbk1b,LOC107717064 non-coding downstream 62222 6812532 ~ 6814574 (+)
G78470 NA non-coding downstream 64467 6814777 ~ 6820562 (+)
G78521 NA non-coding downstream 149572 6899882 ~ 6906647 (+)
G78528 NA non-coding downstream 167306 6917616 ~ 6924022 (+)
G78531 NA non-coding downstream 177044 6927354 ~ 6928056 (+)
LOC103025550 qkia,LOC108413473,LOC107721620,LOC107590898,LOC107697705,LOC103376478,LOC108269894 other upstream 1219630 5452115 ~ 5530055 (+)
G78111 pole2 other upstream 2451501 4289507 ~ 4298184 (+)
g2e3 g2e3 other upstream 2924813 3765780 ~ 3824872 (+)
traf3 traf3,LOC107719479,LOC107694716,LOC107733154,LOC107590913 other upstream 3389941 3322085 ~ 3359744 (+)
G77722 NA other upstream 3771591 2900134 ~ 2978094 (+)
LOC103024862 LOC108430185 other downstream 107044 6857354 ~ 6872405 (+)
G78671 LOC107659230,LOC107583602 other downstream 844397 7594707 ~ 7607664 (+)
fam167b LOC108433301,LOC101067225 other downstream 905997 7656307 ~ 7729001 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other downstream 1779544 8529854 ~ 8549968 (+)
G78818 NA other downstream 1785606 8535916 ~ 8537682 (+)

Expression


Co-expression Network