G78818


Basic Information

Item Value
gene id G78818
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 8535916 ~ 8537682 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106244
aaataaacaaacatacatatatacacatactcacatatctaactatacatatgcttatacatatacacacatacataaatatacatacatattaatacatacacataaatacatacacacacacgcacagttacttctattgttttttgcaaaaatatgtcatgtGTTACGGATTATGTCATGAAATGCCTACCACAATGGAGGCAAGAAACCGCCACCATGCCCCTGCGATCCAGAGGCAGATAGGGAAGAACCCAGTGGACCCAGACCATCCACAGCCCATTAGGAGCCCAGAAGACCCGCGGCCACACATCCCGATGGTAACCATGTGCACACCCCAGATGAGGACGGGGGAGACTCCAGACGAAGCCCCCATGGCAAAGAGCAAGAGTCCAGAGAGCCAAAGGAAGCGAGCAGCCCACCCCCCCGGCAGGCCAGCACCCCCTGCACGAGCCGAGCATGCGGCCCCCGAGATCCCAAGCACCCGGGAACAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106244 True 496 TUCP 0.50 2 8535916 8537682

Neighbor

gene id symbol gene type direction distance location
LOC103031442 LOC103359616 coding upstream 28755 8469601 ~ 8507161 (+)
erich1 NA coding upstream 93361 8415207 ~ 8442555 (+)
ppie ppie coding upstream 726966 7802220 ~ 7808950 (+)
LOC103024072 pabpc4,LOC107654874,LOC107716002 coding upstream 736657 7766569 ~ 7799259 (+)
LOC103024901 NA coding upstream 771239 7759849 ~ 7764677 (+)
hmgcl hmgcl,LOC107583590,LOC107721118,LOC107670875,LOC107715992 coding downstream 14766 8552448 ~ 8566788 (+)
trmt61b NA coding downstream 85719 8623401 ~ 8634193 (+)
greb1 greb1,LOC107719472,LOC107697724,LOC107590942 coding downstream 1228484 9766166 ~ 9819445 (+)
LOC103026171 LOC108413038 coding downstream 1704906 10242588 ~ 10252495 (+)
LOC103026492 NA coding downstream 1744983 10282665 ~ 10292293 (+)
G78810 NA non-coding upstream 23269 8512397 ~ 8512647 (+)
G78806 NA non-coding upstream 25092 8476510 ~ 8510824 (+)
G78797 NA non-coding upstream 50655 8463424 ~ 8485261 (+)
G78808 NA non-coding upstream 56329 8478006 ~ 8479587 (+)
G78794 NA non-coding upstream 128364 8407160 ~ 8407552 (+)
G78824 NA non-coding downstream 55063 8592745 ~ 8593288 (+)
G78834 NA non-coding downstream 112113 8649795 ~ 8672419 (+)
G79035 NA non-coding downstream 754876 9292558 ~ 9293030 (+)
G79041 NA non-coding downstream 835974 9373656 ~ 9373883 (+)
G79042 NA non-coding downstream 836402 9374084 ~ 9375551 (+)
fam167b LOC108433301,LOC101067225 other upstream 806915 7656307 ~ 7729001 (+)
G78671 LOC107659230,LOC107583602 other upstream 928252 7594707 ~ 7607664 (+)
LOC103024862 LOC108430185 other upstream 1663511 6857354 ~ 6872405 (+)
LOC103025550 qkia,LOC108413473,LOC107721620,LOC107590898,LOC107697705,LOC103376478,LOC108269894 other upstream 3005861 5452115 ~ 5530055 (+)
G78111 pole2 other upstream 4237732 4289507 ~ 4298184 (+)
spata17 NA other downstream 957767 9495449 ~ 9554725 (+)
LOC103029457 LOC108441045 other downstream 1345324 9883006 ~ 9955038 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other downstream 2000397 10538079 ~ 10556868 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other downstream 2263675 10801357 ~ 10814914 (+)
G79654 NA other downstream 3017000 11554682 ~ 11555139 (+)

Expression


Co-expression Network