G48450


Basic Information

Item Value
gene id G48450
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12350759 ~ 12571925 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU55095
AAACTGCTATTGATTTATAACAGGGCGGATGTTAGGGCTCTCTCGATTTCCCTGTCTGAAGCTAGAGGACAAGAGGCTGGTATCGCAACTTATCAGGCGTACACGGCCAATTGGGGTAGTAACCCTAGTGATAAGGATATTAAGAAAACAGTTGTGGACATTGAGACGGACTACATCTTCCTGGTGCCAACCCAGACGGCCCTGTACCTCCACACTGACCATGCCAAAACTGCACGAACCTACTCCTACCTGTTCAGTGAGCCCTCTCGCATGCCTATCTTCCCGCTCTGGATGGGTGCCGATCACGCTGACGACCTGCAGTATGTGTTTGGGAAGCCTTTCACCACTCCTTTGGGCTACTTTCCTCGCCATCGTGACGTCTCCAGATACATGATTGCCTACTGGACCAATTTTGCTCAAACTGGTGACCCTAACAAAGGTGAGTCCAGTGTTCCTGTAACCTGGCCTGAGTTCGCAGGCACTGGCCATAAGTACCTAGACATACACAACAGTATGAACAAGAACAGTGTGAAGGAGATGTTGAGAACGCGTTTGGTTTACTACTGGACTACCGTCTTTTCCAGCTACCCTACTGTCAAGAAGAACTGAGCAATGCTAACCTGACTACAAAATCATTTAGCAGTTAATATCATGCTAAGATTCATGCAATAAACAAAATATATGATGATCAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAGAAAACAAAAATCCCCAAAAAAAAGCTGCTATATAAATATTTTTCTTTGATCAGCCAGAGCCTTCGGGATCAACCTGGCTCATGTTACATGTTCTTAATTTGGGCCTGCTCTGTTTAAGTAAATGATCGAACCATCTTGAAGGCAAAGGTGCTACTGATTTATAAAGGAAATGCATCGAGCAGAGGCAGACCTGTATATCCATTTCAAATGTATTCATTAATTATTGCAAGAGTTATTTATAAAATATGAATAGCAATATATATATATTATTTGTTTTTGTTTTTTTTGTTTTGAATTAAAAGGAATTGCTGGAATTGAGTATTGAAAAAGATACTGATCAAATTTATGAAAAAGTAAAGTCTTTATTTCACGGTGATAAACTTCTTAAAGATTAAGGGAAACGTTATGTTTACAAAACCTGTGTGGTAGGAAGTTTTGCCAAAAAAAAGTAATAAAAAGGAAACAAAAATCCTTTCAATCCTATGTTGATAGTCTGGAATAAGACACGTTTCTCTGAGTGACACTTTGGTATCTAAAAGGAGATGGTGGTTGAACAGTGTCCTCGTATATATTTATTTTCTTTGGTCTTTGTTTCGGGAAAATATTCAGAATGCAGCTTTGTGAATCAGCCTTGAAAATAACATTGCTTGCAATTATGGAAATTCTCACTAGTCAAATAGCTCCGTGGTGGATTCTGATTGGCTAGTTGATTCTTGAGGCTTGCTGCATCGTATTTGCACATTTTAAGATGTCGTTTTGAGATCTGAAAACAAATTCTCTCTCTCGTCTTAGAATCACATTTATTCCATTATTTTCCAGTGTTGTAAATTGAAATTTAAAAACCTTGAGTGAGCCATTCTCAAAATAACCATTGACAAATGTTGGTTCTCAGTATTTGGGTCGGCAGATGGCATCTTATCTGCTTCTTTAAGGGACTTGCGTGTTATCAAACTCACCAAGATGTTCTGTTGTGTGAGCTTCTGTTCATTTTAGTCCCTGTTTATAGACTGATCGCAATGTTTGATGACAACCAAATACAAGTCATGGGTATTTAACAGAGAAATTTAGCAGCACTTTACTTCTCAGATGCTTATTTCCTCAGCATTCAAATAGCCACCACACTGAACCCTAAAGATTTGGGATGACACTAAGAAGTGTTGCTTGGAACGGAGAATGTGCATCTACACATAGAACTTGGTATCATTGTAATTTGGGTTGGGTGGGGAAGTATTTGGTGGTGTGTGTGTGTGTGTGACCAACACCTGTTTTCTCTGACACCACTAATGAGAGATGTTAATGTTGGATAATAAGCCAAGAATCTCATAACACTGTCATCTCTTGTTTTAAAGGTGGGATGGGGGTTTCAGACTGTAAGAGAATTCCTGACCTGTCCACCTAAAA
>TU55101
GGGAAATATACACATTTAAAAGTTACAATCTTTGTTTCTGGAAAAACAGTGATGTAAGATAAAGGGAACTGGCCTTTCAACAAAGGCCCTGTTTACACCTGGTATTTAGATGCGTTTTGGTCGATCGGATCACAAGTAAACGAGGAAGAGACACATACCCGTTTACACCTGGTGTTTTAAATGTATTTTCAGATCTTTCGATCTAATGGACAAAATAAGCTTACGCAATTTACATATGAACATGTCCAGAGACAACGGAAAAACATGGAGAGCAGCAGCTTTCGTTTTTGCTCTGATAGCCGCAAGACCAGCCGAACATGGGCGGATGTTAGGGCTCTCTCGATTTCCCTGTCTGAAGCTAGAGGACAAGAGGCTGGTATCGCAACTTATCAGGCGTACACGGCCAATTGGGGTAGTAACCCTAGTGATAAGGATATTAAGAAAACAGTTGTGGACATTGAGACGGACTACATCTTCCTGGTGCCAACCCAGACGGCCCTGTACCTCCACACTGACCATGCCAAAACTGCACGAACCTACTCCTACCTGTTCAGTGAGCCCTCTCGCATGCCTATCTTCCCGCTCTGGATGGGTGCCGATCACGCTGACGACCTGCAGTATGTGTTTGGGAAGCCTTTCACCACTCCTTTGGGCTACTTTCCTCGCCATCGTGACGTCTCCAGATACATGATTGCCTACTGGACCAATTTTGCTCAAACTGGTGACCCTAACAAAGGTGAGTCCAGTGTTCCTGTAACCTGGCCTGAGTTCGCAGGCACTGGCCATAAGTACCTAGACATACACAACAGTATGAACAAGAACAGTGTGAAGGAGATGTTGAGAACGCGTTTGGTTTACTACTGGACTACCGTCTTTTCCAGCTACCCTACTG

Function

GO:

id name namespace
GO:0016071 mRNA metabolic process biological_process
GO:0000375 RNA splicing, via transesterification reactions biological_process
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile biological_process
GO:0006397 mRNA processing biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:0016607 nuclear speck cellular_component
GO:0005681 spliceosomal complex cellular_component
GO:0005685 U1 snRNP cellular_component

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU55095 False 1453 TUCP 0.39 2 12350759 12529810
TU55101 True 320 TUCP 0.46 1 12571606 12571925

Expression


Co-expression Network