G79035


Basic Information

Item Value
gene id G79035
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 9292558 ~ 9293030 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106538
tactgctccttacaacctgacgagtaaaatttagataatactgatctcagtgaataagctagctagcttagcggttagcatctagctaatgctattgctgctcagcctcggagctgcacggctctggactctgtatagcactgaaactctctataacgctgcacggagtgtgtgtttactgctccttacaacctgacgagtaaaatccatacaaaaggcgcaccgtattataagacgcactgtcaatttttgtgaaaattaaaagtttttaagtgcgccttatagtccgaaaaatacggtatgttctttttctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106538 True 315 lncRNA 0.41 2 9292558 9293030

Neighbor

gene id symbol gene type direction distance location
trmt61b NA coding upstream 658365 8623401 ~ 8634193 (+)
hmgcl hmgcl,LOC107583590,LOC107721118,LOC107670875,LOC107715992 coding upstream 725770 8552448 ~ 8566788 (+)
LOC103031442 LOC103359616 coding upstream 785397 8469601 ~ 8507161 (+)
erich1 NA coding upstream 850003 8415207 ~ 8442555 (+)
ppie ppie coding upstream 1483608 7802220 ~ 7808950 (+)
greb1 greb1,LOC107719472,LOC107697724,LOC107590942 coding downstream 473136 9766166 ~ 9819445 (+)
LOC103026171 LOC108413038 coding downstream 949558 10242588 ~ 10252495 (+)
LOC103026492 NA coding downstream 989635 10282665 ~ 10292293 (+)
LOC103026974 NA coding downstream 1035938 10328968 ~ 10336716 (+)
LOC103027561 NA coding downstream 1059384 10352414 ~ 10362045 (+)
G78834 NA non-coding upstream 620139 8649795 ~ 8672419 (+)
G78824 NA non-coding upstream 699270 8592745 ~ 8593288 (+)
LOC111193184 NA non-coding upstream 754177 8536432 ~ 8538381 (+)
G78810 NA non-coding upstream 779911 8512397 ~ 8512647 (+)
G78806 NA non-coding upstream 781734 8476510 ~ 8510824 (+)
G79041 NA non-coding downstream 80626 9373656 ~ 9373883 (+)
G79042 NA non-coding downstream 81054 9374084 ~ 9375551 (+)
G79061 NA non-coding downstream 266023 9559053 ~ 9559269 (+)
G79065 NA non-coding downstream 317705 9610735 ~ 9611764 (+)
G79084 NA non-coding downstream 394465 9687495 ~ 9687721 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other upstream 742590 8529854 ~ 8549968 (+)
G78818 NA other upstream 754876 8535916 ~ 8537682 (+)
fam167b LOC108433301,LOC101067225 other upstream 1563557 7656307 ~ 7729001 (+)
G78671 LOC107659230,LOC107583602 other upstream 1684894 7594707 ~ 7607664 (+)
LOC103024862 LOC108430185 other upstream 2420153 6857354 ~ 6872405 (+)
spata17 NA other downstream 202419 9495449 ~ 9554725 (+)
LOC103029457 LOC108441045 other downstream 589976 9883006 ~ 9955038 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other downstream 1245049 10538079 ~ 10556868 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other downstream 1508327 10801357 ~ 10814914 (+)
G79654 NA other downstream 2261652 11554682 ~ 11555139 (+)

Expression


Co-expression Network