G79084


Basic Information

Item Value
gene id G79084
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 9687495 ~ 9687721 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106590
cagagttcatacacgagaggtccaatgtcagaggtaatccaagaggcagtagtgaaaacacagtccaggtaatacacaagcaatccaatatcagaggcaaggcaataatcggcgtcgagaaaacaaaagcaaggtcatacacaagataaactgagacaagagatatagaacgctttgtaatgaggagaacctacaatacgcggcgtgggtgtttgtgtggagtgctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106590 True 227 lncRNA 0.44 1 9687495 9687721

Neighbor

gene id symbol gene type direction distance location
trmt61b NA coding upstream 1053302 8623401 ~ 8634193 (+)
hmgcl hmgcl,LOC107583590,LOC107721118,LOC107670875,LOC107715992 coding upstream 1120707 8552448 ~ 8566788 (+)
LOC103031442 LOC103359616 coding upstream 1180334 8469601 ~ 8507161 (+)
erich1 NA coding upstream 1244940 8415207 ~ 8442555 (+)
ppie ppie coding upstream 1878545 7802220 ~ 7808950 (+)
greb1 greb1,LOC107719472,LOC107697724,LOC107590942 coding downstream 78445 9766166 ~ 9819445 (+)
LOC103026171 LOC108413038 coding downstream 554867 10242588 ~ 10252495 (+)
LOC103026492 NA coding downstream 594944 10282665 ~ 10292293 (+)
LOC103026974 NA coding downstream 641247 10328968 ~ 10336716 (+)
LOC103027561 NA coding downstream 664693 10352414 ~ 10362045 (+)
G79065 NA non-coding upstream 75731 9610735 ~ 9611764 (+)
G79061 NA non-coding upstream 128226 9559053 ~ 9559269 (+)
G79042 NA non-coding upstream 311944 9374084 ~ 9375551 (+)
G79041 NA non-coding upstream 313612 9373656 ~ 9373883 (+)
G79035 NA non-coding upstream 394465 9292558 ~ 9293030 (+)
G79097 NA non-coding downstream 25491 9713212 ~ 9716264 (+)
G79115 NA non-coding downstream 136348 9824069 ~ 9831085 (+)
LOC111193137 NA non-coding downstream 178471 9866192 ~ 9868258 (+)
G79123 NA non-coding downstream 182879 9870600 ~ 9872719 (+)
G79139 LOC108441044,LOC105911203,LOC107594821,LOC107674076,LOC107719497 non-coding downstream 261868 9949589 ~ 9955787 (+)
spata17 NA other upstream 132770 9495449 ~ 9554725 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other upstream 1137527 8529854 ~ 8549968 (+)
G78818 NA other upstream 1149813 8535916 ~ 8537682 (+)
fam167b LOC108433301,LOC101067225 other upstream 1958494 7656307 ~ 7729001 (+)
G78671 LOC107659230,LOC107583602 other upstream 2079831 7594707 ~ 7607664 (+)
LOC103029457 LOC108441045 other downstream 195285 9883006 ~ 9955038 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other downstream 850358 10538079 ~ 10556868 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other downstream 1113636 10801357 ~ 10814914 (+)
G79654 NA other downstream 1866961 11554682 ~ 11555139 (+)
G79717 NA other downstream 2213374 11901095 ~ 11905385 (+)

Expression


Co-expression Network