G79345


Basic Information

Item Value
gene id G79345
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 10388404 ~ 10391520 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU106919
AGAACTCGATTAAGTACTGTACCGCACCACCACAGAACTCGATCAAGTACTGTACCCCACCACCACAGAACTCGATTAAGTACTGTACCGCACCACCACAGAACTCGATTAAGTACTGTACCCCACCACCACAGAACTTGATTAAGTACTGTAACCCACCACCACAGAACTCGATCAAGTACTGTACCCCACCACCACAGAACTCGATCAAGTACTGTAACCCACCACCACAGAACTCTATCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106919 True 245 lncRNA 0.48 2 10388404 10391520

Neighbor

gene id symbol gene type direction distance location
LOC103027561 NA coding upstream 26359 10352414 ~ 10362045 (+)
LOC103026974 NA coding upstream 51688 10328968 ~ 10336716 (+)
LOC103026492 NA coding upstream 96111 10282665 ~ 10292293 (+)
LOC103026171 LOC108413038 coding upstream 135909 10242588 ~ 10252495 (+)
greb1 greb1,LOC107719472,LOC107697724,LOC107590942 coding upstream 568959 9766166 ~ 9819445 (+)
LOC111193128 NA coding downstream 272938 10664458 ~ 10666674 (+)
LOC103024809 LOC107689792,LOC105902344 coding downstream 336328 10727848 ~ 10764714 (+)
LOC103032219 slc18a2,LOC107670861,LOC107744594,LOC107715963,LOC107689804 coding downstream 1185719 11577239 ~ 11637984 (+)
pex13 pex13 coding downstream 1418713 11810233 ~ 11823175 (+)
kiaa1841 kiaa1841 coding downstream 1494716 11886236 ~ 11962874 (+)
G79341 NA non-coding upstream 40249 10345516 ~ 10348155 (+)
G79179 NA non-coding upstream 196189 10189740 ~ 10192215 (+)
G79193 NA non-coding upstream 222760 10160728 ~ 10165644 (+)
G79183 NA non-coding upstream 257087 10131019 ~ 10131317 (+)
G79174 NA non-coding upstream 275083 10107630 ~ 10113321 (+)
G79334 NA non-coding downstream 9974 10401494 ~ 10423882 (+)
G79379 LOC108430231,LOC107583545 non-coding downstream 60890 10452410 ~ 10468725 (+)
G79381 NA non-coding downstream 86143 10477663 ~ 10558011 (+)
G79384 NA non-coding downstream 114817 10506337 ~ 10557504 (+)
G79395 NA non-coding downstream 238439 10629959 ~ 10635012 (+)
LOC103029457 LOC108441045 other upstream 433366 9883006 ~ 9955038 (+)
spata17 NA other upstream 833679 9495449 ~ 9554725 (+)
G78817 gale,LOC107583591,LOC107721820,LOC107583106 other upstream 1838436 8529854 ~ 8549968 (+)
G78818 NA other upstream 1850722 8535916 ~ 8537682 (+)
fam167b LOC108433301,LOC101067225 other upstream 2659403 7656307 ~ 7729001 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other downstream 146559 10538079 ~ 10556868 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other downstream 409837 10801357 ~ 10814914 (+)
G79654 NA other downstream 1163162 11554682 ~ 11555139 (+)
G79717 NA other downstream 1509575 11901095 ~ 11905385 (+)
G79761 LOC108438749 other downstream 1673324 12064844 ~ 12076211 (+)

Expression


Co-expression Network