G48278


Basic Information

Item Value
gene id G48278
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12679494 ~ 12679697 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU54899
CGCCCCCCAGTGGTGAACCATTGAAATTTCGAAACACTTGTGATGTAACGAAGCCTCATTTACTGAAATCACATGACTGTGGCAATTTGATACACGCTCCGAACCACTGATTCAAAACAAAAGGTTCACAAAGCTTCGAAGCTTCATGAAGCAGTGTTTTGAAATCGGCCATCACTAGATATTGTTGAATAAAGTCGTTTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54899 True 204 lncRNA 0.40 1 12679494 12679697

Neighbor

gene id symbol gene type direction distance location
CI01000006_12608120_12620040 NA coding upstream 59383 12608120 ~ 12620111 (+)
CI01000006_12592270_12606447 NA coding upstream 72180 12591838 ~ 12607314 (+)
CI01000006_12447621_12461167 NA coding upstream 218303 12447621 ~ 12461191 (+)
CI01000006_12345828_12346634 NA coding upstream 332574 12345828 ~ 12346920 (+)
CI01000006_12315343_12316143 RFESD coding upstream 363263 12315299 ~ 12316231 (+)
CI01000006_12684154_12695960 DNAJC21 coding downstream 3864 12683561 ~ 12696396 (+)
CI01000006_12764729_12782405 NA coding downstream 84219 12763916 ~ 12783368 (+)
CI01000006_12808989_12841786 NEDD4L coding downstream 129292 12808989 ~ 12842198 (+)
CI01000006_12904462_12905358 NA coding downstream 223061 12902758 ~ 12905614 (+)
CI01000006_12910607_12915808 NA coding downstream 230910 12910607 ~ 12915946 (+)
G48079 NA non-coding upstream 97018 12580325 ~ 12582476 (+)
G48270 NA non-coding upstream 101554 12577495 ~ 12577940 (+)
G48075 NA non-coding upstream 108333 12350762 ~ 12571161 (+)
G48122 NA non-coding upstream 146820 12519346 ~ 12532674 (+)
G48251 NA non-coding upstream 179294 12497354 ~ 12500200 (+)
G48284 NA non-coding downstream 1140 12680837 ~ 12681068 (+)
G48285 NA non-coding downstream 20968 12700665 ~ 12700892 (+)
G48286 NA non-coding downstream 21446 12701143 ~ 12701430 (+)
G48281 NA non-coding downstream 25390 12705087 ~ 12706379 (+)
G48288 NA non-coding downstream 27094 12706791 ~ 12706994 (+)
G48081 NA other upstream 294667 12377006 ~ 12384827 (+)
G48094 NA other upstream 399953 12277620 ~ 12279541 (+)
G47318 NA other upstream 1041242 11624267 ~ 11638252 (+)
G47159 NA other upstream 1157791 11416229 ~ 11521703 (+)
G47145 NA other upstream 2167688 10485358 ~ 10511806 (+)

Expression


Co-expression Network