G48284


Basic Information

Item Value
gene id G48284
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 12680837 ~ 12681068 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU54905
TTAATAATTTAGTGGTTTAAAAACAGCATAGAGTTTAACATCAAATCAAATCTGGCTGTATGAATGTCAGGAAAGAAATCCAAACGGTTTCTTTATCAGTAACACACTGATTGAATAAATTATACAGACTTTTTTTTTTTAGCTCTCAAACAACCAACATTCTTTCTTTTGAAAAGTTCTTCCAGTGGGGACATTGTCCCTTTTAAAACGTTTCCTGTGACAACAGTAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU54905 True 232 lncRNA 0.34 1 12680837 12681068

Neighbor

gene id symbol gene type direction distance location
CI01000006_12608120_12620040 NA coding upstream 60726 12608120 ~ 12620111 (+)
CI01000006_12592270_12606447 NA coding upstream 73523 12591838 ~ 12607314 (+)
CI01000006_12447621_12461167 NA coding upstream 219646 12447621 ~ 12461191 (+)
CI01000006_12345828_12346634 NA coding upstream 333917 12345828 ~ 12346920 (+)
CI01000006_12315343_12316143 RFESD coding upstream 364606 12315299 ~ 12316231 (+)
CI01000006_12684154_12695960 DNAJC21 coding downstream 2493 12683561 ~ 12696396 (+)
CI01000006_12764729_12782405 NA coding downstream 82848 12763916 ~ 12783368 (+)
CI01000006_12808989_12841786 NEDD4L coding downstream 127921 12808989 ~ 12842198 (+)
CI01000006_12904462_12905358 NA coding downstream 221690 12902758 ~ 12905614 (+)
CI01000006_12910607_12915808 NA coding downstream 229539 12910607 ~ 12915946 (+)
G48278 NA non-coding upstream 1140 12679494 ~ 12679697 (+)
G48079 NA non-coding upstream 98361 12580325 ~ 12582476 (+)
G48270 NA non-coding upstream 102897 12577495 ~ 12577940 (+)
G48075 NA non-coding upstream 109676 12350762 ~ 12571161 (+)
G48285 NA non-coding downstream 19597 12700665 ~ 12700892 (+)
G48286 NA non-coding downstream 20075 12701143 ~ 12701430 (+)
G48281 NA non-coding downstream 24019 12705087 ~ 12706379 (+)
G48288 NA non-coding downstream 25723 12706791 ~ 12706994 (+)
G48289 NA non-coding downstream 26484 12707552 ~ 12707794 (+)
G48081 NA other upstream 296010 12377006 ~ 12384827 (+)
G48094 NA other upstream 401296 12277620 ~ 12279541 (+)
G47318 NA other upstream 1042585 11624267 ~ 11638252 (+)
G47159 NA other upstream 1159134 11416229 ~ 11521703 (+)
G47145 NA other upstream 2169031 10485358 ~ 10511806 (+)

Expression


Co-expression Network