Gene
RNA
| Item | Value |
|---|---|
| gene id | G48576 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 12699472 ~ 12699782 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU55244 | True | 311 | lncRNA | 0.40 | 1 | 12699472 | 12699782 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_12677322_12678268 | NA | coding | downstream | 21204 | 12677162 ~ 12678268 (-) |
| CI01000006_12670692_12674459 | NA | coding | downstream | 25013 | 12670692 ~ 12674459 (-) |
| CI01000006_12647432_12651091 | NA | coding | downstream | 48381 | 12647003 ~ 12651091 (-) |
| CI01000006_12583905_12591335 | GTF3C5 | coding | downstream | 108137 | 12583784 ~ 12591335 (-) |
| CI01000006_12569291_12581457 | CELL, CEL.2, CEL.1 | coding | downstream | 116985 | 12569205 ~ 12582487 (-) |
| CI01000006_12718517_12732483 | PRLR, PRLRA | coding | upstream | 18604 | 12718386 ~ 12733092 (-) |
| CI01000006_12853718_12865868 | NA | coding | upstream | 153899 | 12853681 ~ 12865868 (-) |
| CI01000006_12876023_12888072 | NA | coding | upstream | 176046 | 12875828 ~ 12888072 (-) |
| CI01000006_12891987_12901219 | ZNF532 | coding | upstream | 191764 | 12891546 ~ 12901219 (-) |
| CI01000006_12921799_12924125 | RX3, RAX | coding | upstream | 221833 | 12921615 ~ 12924156 (-) |
| G48571 | NA | non-coding | downstream | 45582 | 12653629 ~ 12653890 (-) |
| G48459 | NA | non-coding | downstream | 235961 | 12462404 ~ 12463511 (-) |
| G48422 | NA | non-coding | downstream | 521278 | 12171561 ~ 12178194 (-) |
| G48490 | NA | non-coding | downstream | 539389 | 12159558 ~ 12160083 (-) |
| G48413 | NA | non-coding | downstream | 616845 | 12082243 ~ 12082627 (-) |
| G48577 | NA | non-coding | upstream | 287 | 12700069 ~ 12700268 (-) |
| G48578 | NA | non-coding | upstream | 1808 | 12701590 ~ 12701857 (-) |
| G48579 | NA | non-coding | upstream | 9488 | 12709270 ~ 12709479 (-) |
| G48580 | NA | non-coding | upstream | 13373 | 12713155 ~ 12713603 (-) |
| G48627 | NA | non-coding | upstream | 95755 | 12795537 ~ 12795763 (-) |
| CI01000006_12348300_12348961 | GLRX | other | downstream | 350401 | 12347180 ~ 12349383 (-) |
| CI01000006_11651067_11653761 | SMD3, SNRPD3, SNRPD3L, MGC52856 | other | downstream | 1045065 | 11650363 ~ 11654424 (-) |
| G47658 | NA | other | downstream | 1666345 | 11030911 ~ 11033127 (-) |
| CI01000006_10453630_10483241 | NA | other | downstream | 2211037 | 10453613 ~ 10484006 (-) |
