G79903



Basic Information


Item Value
gene id G79903
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 12108809 ~ 12109104 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU107636
tttggaaCATAttgcatacagtaaatatagcctacatttgtgtagtactgtaaatgggggggtcctacaccacaacaaataaataaaaacaacagaaagacaacatatttccatggacttgtctgcgtttgaatttgtacagcggcctcatgaagtcaaaaacacaaccaaatacttctgataacagtgctctgaattgatcttgtcagtgtttatttgatgctctgtaagagataagcataaaatatctgtgtgtgttgttttggtggaaggaatcagttttgctggagatttgt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU107636 True 296 lncRNA 0.36 1 12108809 12109104

Neighbor


gene id symbol gene type direction distance location
LOC103021592 xpo1b,LOC108438731,LOC108269901,LOC107715966,LOC107744605,LOC107583557 coding upstream 68099 12002793 ~ 12040710 (+)
kiaa1841 kiaa1841 coding upstream 145935 11886236 ~ 11962874 (+)
pex13 pex13 coding upstream 285634 11810233 ~ 11823175 (+)
LOC103032219 slc18a2,LOC107670861,LOC107744594,LOC107715963,LOC107689804 coding upstream 470825 11577239 ~ 11637984 (+)
LOC103024809 LOC107689792,LOC105902344 coding upstream 1344095 10727848 ~ 10764714 (+)
LOC111193190 NA coding downstream 45819 12154923 ~ 12174659 (+)
LOC103024200 LOC108438733 coding downstream 79654 12188758 ~ 12261237 (+)
LOC103034755 asmt2,LOC108438736,LOC108270049,LOC107654826,LOC105908292,LOC106611414,LOC107721495,LOC107668509 coding downstream 181293 12290397 ~ 12312938 (+)
jade1 jade1 coding downstream 205990 12315094 ~ 12338375 (+)
exo1 LOC107744706,LOC107081139 coding downstream 424753 12533857 ~ 12549090 (+)
G79752 NA non-coding upstream 82603 12025586 ~ 12026206 (+)
LOC111193192 NA non-coding upstream 110885 11991672 ~ 11997924 (+)
LOC111193193 kiaa1841 non-coding upstream 234331 11834769 ~ 11874478 (+)
G79712 NA non-coding upstream 239089 11865389 ~ 11869720 (+)
G79710 NA non-coding upstream 240100 11855773 ~ 11868709 (+)
G79914 NA non-coding downstream 47211 12156315 ~ 12161780 (+)
G79924 NA non-coding downstream 172741 12281845 ~ 12283581 (+)
G80024 NA non-coding downstream 403898 12513002 ~ 12542649 (+)
G80026 yipf4,LOC106576945 non-coding downstream 413600 12522704 ~ 12523100 (+)
G80028 NA non-coding downstream 419522 12528626 ~ 12531849 (+)
G79761 LOC108438749 other upstream 32598 12064844 ~ 12076211 (+)
G79717 NA other upstream 203424 11901095 ~ 11905385 (+)
G79654 NA other upstream 553670 11554682 ~ 11555139 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other upstream 1293895 10801357 ~ 10814914 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other upstream 1551941 10538079 ~ 10556868 (+)
LOC103044397 pgrmc2,LOC108438735,LOC107711856,LOC107721516,LOC107654846,LOC107668512 other downstream 114173 12223277 ~ 12279506 (+)
LOC103027475 fmn2a,LOC108431642,LOC107583499,LOC107750852,LOC107668605,LOC105906094 other downstream 1612797 13721901 ~ 13807027 (+)
LOC103026193 reep3,LOC108431646,LOC105906120,LOC102789435 other downstream 1816765 13925869 ~ 13952198 (+)
LOC103028846 LOC108431654 other downstream 2404306 14513410 ~ 14534923 (+)
G80648 NA other downstream 2616823 14725927 ~ 14728799 (+)

Expression



Co-expression Network