G79914


Basic Information

Item Value
gene id G79914
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 12156315 ~ 12161780 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU107647
Gtgtcatggtgtgcacagaattgcagacacgtgcagatactgataaaaatatatgtttattataaaataaacagatgtaaacgtagtcgatacagaaacaatgggtaatcaccagtaaacagagcaatgaaggcaaaaccataccataaacgagaaacagtccagagttcatacacgagagatccaatatcagaggtaatccaagaggcagtagtgaaaacacagtccaggtaatacacaaacaatccagtatcagaggcaaaggcaataatcggcgtcgagaaaacaaaagcaaggtcatacacaagataaactgaagacaagagatatagaacgctttgtaatgaggagaacctacaatacgcggcgtgggtgtttgtctggcgtgcacctttatagtgccagtaatcagtattcgggac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107647 True 422 lncRNA 0.41 2 12156315 12161780

Neighbor

gene id symbol gene type direction distance location
LOC103021592 xpo1b,LOC108438731,LOC108269901,LOC107715966,LOC107744605,LOC107583557 coding upstream 115605 12002793 ~ 12040710 (+)
kiaa1841 kiaa1841 coding upstream 193441 11886236 ~ 11962874 (+)
pex13 pex13 coding upstream 333140 11810233 ~ 11823175 (+)
LOC103032219 slc18a2,LOC107670861,LOC107744594,LOC107715963,LOC107689804 coding upstream 518331 11577239 ~ 11637984 (+)
LOC103024809 LOC107689792,LOC105902344 coding upstream 1391601 10727848 ~ 10764714 (+)
LOC103024200 LOC108438733 coding downstream 26978 12188758 ~ 12261237 (+)
LOC103034755 asmt2,LOC108438736,LOC108270049,LOC107654826,LOC105908292,LOC106611414,LOC107721495,LOC107668509 coding downstream 128617 12290397 ~ 12312938 (+)
jade1 jade1 coding downstream 153314 12315094 ~ 12338375 (+)
exo1 LOC107744706,LOC107081139 coding downstream 372077 12533857 ~ 12549090 (+)
LOC103045432 NA coding downstream 403332 12565112 ~ 12579232 (+)
G79903 NA non-coding upstream 47211 12108809 ~ 12109104 (+)
G79752 NA non-coding upstream 130109 12025586 ~ 12026206 (+)
LOC111193192 NA non-coding upstream 158391 11991672 ~ 11997924 (+)
LOC111193193 kiaa1841 non-coding upstream 281837 11834769 ~ 11874478 (+)
G79924 NA non-coding downstream 120065 12281845 ~ 12283581 (+)
G80024 NA non-coding downstream 351222 12513002 ~ 12542649 (+)
G80026 yipf4,LOC106576945 non-coding downstream 360924 12522704 ~ 12523100 (+)
G80028 NA non-coding downstream 366846 12528626 ~ 12531849 (+)
G80031 NA non-coding downstream 420020 12581800 ~ 12667992 (+)
G79761 LOC108438749 other upstream 80104 12064844 ~ 12076211 (+)
G79717 NA other upstream 250930 11901095 ~ 11905385 (+)
G79654 NA other upstream 601176 11554682 ~ 11555139 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other upstream 1341401 10801357 ~ 10814914 (+)
LOC103025860 pcgf5b,LOC103025860,LOC108430201,LOC107583544,LOC107553461,LOC107715951,LOC107670868 other upstream 1599447 10538079 ~ 10556868 (+)
LOC103044397 pgrmc2,LOC108438735,LOC107711856,LOC107721516,LOC107654846,LOC107668512 other downstream 61497 12223277 ~ 12279506 (+)
LOC103027475 fmn2a,LOC108431642,LOC107583499,LOC107750852,LOC107668605,LOC105906094 other downstream 1560121 13721901 ~ 13807027 (+)
LOC103026193 reep3,LOC108431646,LOC105906120,LOC102789435 other downstream 1764089 13925869 ~ 13952198 (+)
LOC103028846 LOC108431654 other downstream 2351630 14513410 ~ 14534923 (+)
G80648 NA other downstream 2564147 14725927 ~ 14728799 (+)

Expression


Co-expression Network