G79924


Basic Information

Item Value
gene id G79924
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 12281845 ~ 12283581 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU107661
attaatgatgttgatgtgagcagtaattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaatgatgttgatgttgatgtgagcagtgattaatGATGTTGAtgtgagcagtaattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtaattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaATAAtgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaatgatgttgatgtgagcagtgattaatgatgttgatgttgatgtgagcagtgatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU107661 True 416 lncRNA 0.35 2 12281845 12283581

Neighbor

gene id symbol gene type direction distance location
LOC103024200 LOC108438733 coding upstream 20608 12188758 ~ 12261237 (+)
LOC111193190 NA coding upstream 107186 12154923 ~ 12174659 (+)
LOC103021592 xpo1b,LOC108438731,LOC108269901,LOC107715966,LOC107744605,LOC107583557 coding upstream 241135 12002793 ~ 12040710 (+)
kiaa1841 kiaa1841 coding upstream 318971 11886236 ~ 11962874 (+)
pex13 pex13 coding upstream 458670 11810233 ~ 11823175 (+)
LOC103034755 asmt2,LOC108438736,LOC108270049,LOC107654826,LOC105908292,LOC106611414,LOC107721495,LOC107668509 coding downstream 6816 12290397 ~ 12312938 (+)
jade1 jade1 coding downstream 31513 12315094 ~ 12338375 (+)
exo1 LOC107744706,LOC107081139 coding downstream 250276 12533857 ~ 12549090 (+)
LOC103045432 NA coding downstream 281531 12565112 ~ 12579232 (+)
LOC103046040 NA coding downstream 457778 12741359 ~ 12748024 (+)
G79914 NA non-coding upstream 120065 12156315 ~ 12161780 (+)
G79903 NA non-coding upstream 172741 12108809 ~ 12109104 (+)
G79752 NA non-coding upstream 255639 12025586 ~ 12026206 (+)
LOC111193192 NA non-coding upstream 283921 11991672 ~ 11997924 (+)
G79712 NA non-coding upstream 412125 11865389 ~ 11869720 (+)
G80024 NA non-coding downstream 229421 12513002 ~ 12542649 (+)
G80026 yipf4,LOC106576945 non-coding downstream 239123 12522704 ~ 12523100 (+)
G80028 NA non-coding downstream 245045 12528626 ~ 12531849 (+)
G80031 NA non-coding downstream 298219 12581800 ~ 12667992 (+)
G80114 NA non-coding downstream 538377 12821958 ~ 12823957 (+)
LOC103044397 pgrmc2,LOC108438735,LOC107711856,LOC107721516,LOC107654846,LOC107668512 other upstream 2339 12223277 ~ 12279506 (+)
G79761 LOC108438749 other upstream 205634 12064844 ~ 12076211 (+)
G79717 NA other upstream 376460 11901095 ~ 11905385 (+)
G79654 NA other upstream 726706 11554682 ~ 11555139 (+)
fam98a fam98a,LOC107583540,LOC107744493,LOC107670808 other upstream 1466931 10801357 ~ 10814914 (+)
LOC103027475 fmn2a,LOC108431642,LOC107583499,LOC107750852,LOC107668605,LOC105906094 other downstream 1438320 13721901 ~ 13807027 (+)
LOC103026193 reep3,LOC108431646,LOC105906120,LOC102789435 other downstream 1642288 13925869 ~ 13952198 (+)
LOC103028846 LOC108431654 other downstream 2229829 14513410 ~ 14534923 (+)
G80648 NA other downstream 2442346 14725927 ~ 14728799 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other downstream 2446927 14730508 ~ 14798604 (+)

Expression


Co-expression Network