G80745


Basic Information

Item Value
gene id G80745
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 15091192 ~ 15093209 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU108762
ggggggggggggggccccccccccccccccgcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccacccccccccccccccccaccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccctttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108762 True 230 lncRNA 0.98 2 15091192 15093209

Neighbor

gene id symbol gene type direction distance location
peli1 peli1,peli1b,LOC107715974,LOC107583279,LOC107654901,LOC107670869,LOC107583565 coding upstream 140113 14892427 ~ 14951079 (+)
LOC103032735 LOC103032735,LOC108431665,LOC108270066,LOC107715976,LOC107583272,LOC107720922,LOC107670885,LOC107583566,LOC107654900 coding upstream 211486 14836482 ~ 14879706 (+)
LOC111193201 NA coding upstream 325169 14763570 ~ 14766023 (+)
entpd6 entpd6 coding upstream 368515 14695593 ~ 14722677 (+)
LOC103027375 LOC108431653 coding upstream 580162 14495258 ~ 14511030 (+)
LOC111193204 NA coding downstream 414171 15507380 ~ 15542286 (+)
eno4 NA coding downstream 589164 15682373 ~ 15704118 (+)
pla2g4f NA coding downstream 771274 15864483 ~ 15891088 (+)
kcnk18 NA coding downstream 804315 15897524 ~ 15920726 (+)
LOC103040417 ctsb,LOC108433939,LOC107733172,LOC102299207,LOC107752788 coding downstream 846194 15939403 ~ 15947994 (+)
LOC111193202 NA non-coding upstream 121247 14963233 ~ 14969945 (+)
G80674 NA non-coding upstream 126438 14964079 ~ 14964754 (+)
G80663 NA non-coding upstream 225829 14822876 ~ 14865363 (+)
G80662 NA non-coding upstream 268944 14821755 ~ 14822248 (+)
G80590 ube2d1a,LOC103029158,LOC108270474,LOC108431657,LOC107717106,LOC107553913,LOC107663272,LOC107733527,LOC105911631,LOC107583697 non-coding upstream 444825 14640117 ~ 14646367 (+)
G80787 ehbp1 non-coding downstream 161205 15254414 ~ 15259347 (+)
G80864 NA non-coding downstream 505470 15598679 ~ 15620782 (+)
G80867 NA non-coding downstream 530630 15623839 ~ 15624119 (+)
G80868 NA non-coding downstream 537959 15631168 ~ 15631558 (+)
G80869 NA non-coding downstream 571537 15664746 ~ 15664954 (+)
LOC111188193 LOC108431664 other upstream 256113 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 288160 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 292588 14730508 ~ 14798604 (+)
G80648 NA other upstream 362393 14725927 ~ 14728799 (+)
LOC103028846 LOC108431654 other upstream 556269 14513410 ~ 14534923 (+)
LOC111193203 NA other downstream 81326 15174535 ~ 15203787 (+)
G80857 NA other downstream 470778 15563987 ~ 15583331 (+)
cmpk2 cmpk2 other downstream 2934098 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 3366914 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 3418413 18511622 ~ 18520947 (+)

Expression


Co-expression Network