G80857


Basic Information

Item Value
gene id G80857
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 15563987 ~ 15583331 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU108900
caaAGTTGAGGAACACTAGTTTGGCCTGGATAGCAGGAAAGAGCTTGATGATGAGAGGAATAGCGATGTAGATTCCTAAAACCCAGAGAAAGATCCTCCTGAGCCTCCACATCAAACCAGTTCTCCTGAGTTTCCTGCCCATGGTTTTGTCCCACTGCCCGTCTCCTCCGGAGCTCTGCTTGCCGTCCAGCAGCGCCCTGTCGGCGGCGTCGTGCTGCTGCTCTGCGCCGGGGGACGGGTTCCGTTTTCTCATCCCTGCAGCGGGACAGGAGCAGAGGATCAGCGGGGGAGCGAGGCGAGGTTCCGGGGGCGGTGAGCGCGGGGCGGCCGGAGGGTCGGTAGCTGATCAGGCGGGGGGTGGACGGTCGGACCGGGAGCTGTGATCTCTGAGATCTCTCCTCTACATTGTTTGCTGAAGTGAGAGATCCGCAGAGAGCAGCTGATCACAACAACCTTTACCCAGGTTCcccctcagccaatcagcaacCAGCGTTGAGGTGGGAACCAATGAGCGGAGAGATATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU108900 True 525 TUCP 0.59 2 15563987 15583331

Neighbor

gene id symbol gene type direction distance location
LOC111193204 NA coding upstream 21701 15507380 ~ 15542286 (+)
wdpcp wdpcp coding upstream 411506 15024469 ~ 15152481 (+)
peli1 peli1,peli1b,LOC107715974,LOC107583279,LOC107654901,LOC107670869,LOC107583565 coding upstream 612908 14892427 ~ 14951079 (+)
LOC103032735 LOC103032735,LOC108431665,LOC108270066,LOC107715976,LOC107583272,LOC107720922,LOC107670885,LOC107583566,LOC107654900 coding upstream 684281 14836482 ~ 14879706 (+)
LOC111193201 NA coding upstream 797964 14763570 ~ 14766023 (+)
eno4 NA coding downstream 99042 15682373 ~ 15704118 (+)
pla2g4f NA coding downstream 281152 15864483 ~ 15891088 (+)
kcnk18 NA coding downstream 314193 15897524 ~ 15920726 (+)
LOC103040417 ctsb,LOC108433939,LOC107733172,LOC102299207,LOC107752788 coding downstream 356072 15939403 ~ 15947994 (+)
LOC111193130 NA coding downstream 843194 16426525 ~ 16440795 (+)
G80787 ehbp1 non-coding upstream 304640 15254414 ~ 15259347 (+)
G80745 NA non-coding upstream 470778 15091192 ~ 15093209 (+)
LOC111193202 NA non-coding upstream 594042 14963233 ~ 14969945 (+)
G80674 NA non-coding upstream 599233 14964079 ~ 14964754 (+)
G80663 NA non-coding upstream 698624 14822876 ~ 14865363 (+)
G80864 NA non-coding downstream 15348 15598679 ~ 15620782 (+)
G80867 NA non-coding downstream 40508 15623839 ~ 15624119 (+)
G80868 NA non-coding downstream 47837 15631168 ~ 15631558 (+)
G80869 NA non-coding downstream 81415 15664746 ~ 15664954 (+)
G80881 NA non-coding downstream 126254 15709585 ~ 15711163 (+)
LOC111193203 NA other upstream 360200 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 728908 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 760955 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 765383 14730508 ~ 14798604 (+)
G80648 NA other upstream 835188 14725927 ~ 14728799 (+)
cmpk2 cmpk2 other downstream 2443976 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 2876792 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 2928291 18511622 ~ 18520947 (+)
G81704 NA other downstream 3346907 18930238 ~ 18930754 (+)
G81761 NA other downstream 4082405 19665736 ~ 19666047 (+)

Expression


Co-expression Network