G81061 (LOC108433921,LOC107733188)


Basic Information

Item Value
gene id G81061
gene name LOC108433921,LOC107733188
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 16403332 ~ 16404968 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109194
TGTAGGTATGTGATCCGGTTCTGCACCAGCTCCGAGAGCTCCTTCGCCTCCTTCTCTCTCCAGTCTCCAGCTCCGTCTGCCTGGCTCAGATGATACAGGTCTGTCATGATGGACCTCTGCTGGTGCCCCAGGTTATGCAGGAGGACGTCGATGTGTTTCTGCAGATCTCCGCTCTCCACATGCGCCAGCTTCTTCACCTCATTCCTCACAAAATACCACAGCTCCCGAACACCGTTCTCCGTCTTCCTCCTCAGCTCCTCCTGATTCTTCCCTGGcc

Function

NR:

description
PREDICTED: alpha-(1,6)-fucosyltransferase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109194 True 277 lncRNA 0.56 2 16403332 16404968

Neighbor

gene id symbol gene type direction distance location
LOC103040417 ctsb,LOC108433939,LOC107733172,LOC102299207,LOC107752788 coding upstream 455338 15939403 ~ 15947994 (+)
kcnk18 NA coding upstream 482606 15897524 ~ 15920726 (+)
pla2g4f NA coding upstream 512244 15864483 ~ 15891088 (+)
eno4 NA coding upstream 699214 15682373 ~ 15704118 (+)
LOC111193204 NA coding upstream 861046 15507380 ~ 15542286 (+)
LOC111193130 NA coding downstream 21557 16426525 ~ 16440795 (+)
dnal1 dnal1 coding downstream 58933 16463901 ~ 16467758 (+)
tedc1 NA coding downstream 66887 16471855 ~ 16486398 (+)
tmem121 tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding downstream 113248 16518216 ~ 16539460 (+)
ccdc28a ccdc28a coding downstream 181219 16586187 ~ 16593573 (+)
G81048 fut8,LOC108433921 non-coding upstream 7629 16392302 ~ 16395703 (+)
G81018 NA non-coding upstream 130133 16269073 ~ 16273199 (+)
G81017 NA non-coding upstream 135724 16267307 ~ 16267608 (+)
G81011 NA non-coding upstream 232356 16164480 ~ 16170976 (+)
G80998 NA non-coding upstream 316374 16081318 ~ 16086958 (+)
G81062 NA non-coding downstream 1296 16406264 ~ 16474654 (+)
G81083 NA non-coding downstream 120516 16525484 ~ 16526004 (+)
G81074 NA non-coding downstream 164035 16569003 ~ 16662616 (+)
G81103 NA non-coding downstream 210234 16615202 ~ 16616148 (+)
G81105 NA non-coding downstream 212719 16617687 ~ 16618124 (+)
G80857 NA other upstream 820001 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 1199545 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 1568253 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 1600300 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 1604728 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 1622339 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 2055155 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 2106654 18511622 ~ 18520947 (+)
G81704 NA other downstream 2525270 18930238 ~ 18930754 (+)
G81761 NA other downstream 3260768 19665736 ~ 19666047 (+)

Expression


Co-expression Network