G81062


Basic Information

Item Value
gene id G81062
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 16406264 ~ 16474654 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109199
CATCAGCAGGTAGGCTGCGGTAGGAGTTGATCTGCTCCTTGGCTCGGATCAGCTGCTCCTCCAGACTACGCAGCTTCCCTACAGCTCCAACACCTTCTACCTGACCATCCGGCaacctgaaagagagagagagagagagagagaaagagagagaagggggtgagagtgtgtttgtgtgtgtgtgtgtgtgtgtgagaaagtgtgtgtgtgtgtgtgtgtgtgtgtgacagagagaaagtttgtgtgtgagagagagtgagtgtgtgtgagtgtgtgtgtgtgagagagagagtgtgtgtaagagtgagtgtttgtgtgaaagtgtgtgtaacagagttTGTGTTACAGAGAATGTGCGAGTTtgtgtaagtatgtgtgtgtgagtatgtttGTATGAGTCTGTaagagtgaaagtgtgtgtgtaagagagtatGTGTATGTGGGagtgagagtgtaagagagaatgcaagtgtgagaaagtgtgtgtgagtgtgagctagagagtgagagtgtgtttaagagagtgtgtgtgagtgtaagtgtgtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109199 True 547 lncRNA 0.47 2 16406264 16474654

Neighbor

gene id symbol gene type direction distance location
LOC103040417 ctsb,LOC108433939,LOC107733172,LOC102299207,LOC107752788 coding upstream 458270 15939403 ~ 15947994 (+)
kcnk18 NA coding upstream 485538 15897524 ~ 15920726 (+)
pla2g4f NA coding upstream 515176 15864483 ~ 15891088 (+)
eno4 NA coding upstream 702146 15682373 ~ 15704118 (+)
LOC111193204 NA coding upstream 863978 15507380 ~ 15542286 (+)
tmem121 tmem121a,tmem121,LOC107594772,LOC107674105,LOC107592808,LOC107697696 coding downstream 43562 16518216 ~ 16539460 (+)
ccdc28a ccdc28a coding downstream 111533 16586187 ~ 16593573 (+)
ect2l NA coding downstream 119893 16594547 ~ 16608457 (+)
LOC103021824 efr3b,LOC107697777,LOC107752767,LOC107592778 coding downstream 213264 16687918 ~ 16713041 (+)
LOC103022442 LOC108433935,LOC100537549,LOC107592775,LOC107752809,LOC105908160 coding downstream 246571 16721225 ~ 16729066 (+)
G81061 LOC108433921,LOC107733188 non-coding upstream 1296 16403332 ~ 16404968 (+)
G81048 fut8,LOC108433921 non-coding upstream 10561 16392302 ~ 16395703 (+)
G81018 NA non-coding upstream 133065 16269073 ~ 16273199 (+)
G81017 NA non-coding upstream 138656 16267307 ~ 16267608 (+)
G81011 NA non-coding upstream 235288 16164480 ~ 16170976 (+)
G81083 NA non-coding downstream 50830 16525484 ~ 16526004 (+)
G81074 NA non-coding downstream 94349 16569003 ~ 16662616 (+)
G81103 NA non-coding downstream 140548 16615202 ~ 16616148 (+)
G81105 NA non-coding downstream 143033 16617687 ~ 16618124 (+)
G81106 NA non-coding downstream 144929 16619583 ~ 16621422 (+)
G80857 NA other upstream 822933 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 1202477 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 1571185 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 1603232 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 1607660 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 1552653 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 1985469 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 2036968 18511622 ~ 18520947 (+)
G81704 NA other downstream 2455584 18930238 ~ 18930754 (+)
G81761 NA other downstream 3191082 19665736 ~ 19666047 (+)

Expression


Co-expression Network