G81083


Basic Information

Item Value
gene id G81083
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 16525484 ~ 16526004 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109233
ggtTTTAGACATATGTGTTGTAGCTTATCCAGTATACTAATTAACAATAATTTAACCCAAAATATTatccaaaaatgtaaataacagctctgaacaaataaacaaagaaatacctAACTTGTGGgcccacacacgcacactcacacacactcagaaaagtaatagaaaaataaaagaaacaaaaagttgcAGGCCTGAGTCGTGGCTTGGGTACGGTGAGGCTCAGAACTTTAATAGCCGCTTCACTTACTTAAagtaagcaaaataaaatatttgtttgtgcACACTCAGTACTCACGACCTCTCTAGAGAATGTTCTGGGTGTCTGGTGAAAGCAGGACGACGTAGAATCAGCGAAGTTGTAGTTTAGGCAGTCTAGTAGAAGTTTAGGGTGAGAGTGAGGCTCATGGAATGGTGGAGCAGCCAAGAAGTCATGAAACAGCTCCCTCGTCAGCACTAAAGCTCTATGTAGCTCACTGGGCTCGTCAGAAACACTGTCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109233 True 501 lncRNA 0.41 2 16525484 16526004

Neighbor

gene id symbol gene type direction distance location
tedc1 NA coding upstream 39086 16471855 ~ 16486398 (+)
dnal1 dnal1 coding upstream 57726 16463901 ~ 16467758 (+)
LOC111193130 NA coding upstream 84689 16426525 ~ 16440795 (+)
LOC103040417 ctsb,LOC108433939,LOC107733172,LOC102299207,LOC107752788 coding upstream 577490 15939403 ~ 15947994 (+)
kcnk18 NA coding upstream 604758 15897524 ~ 15920726 (+)
ccdc28a ccdc28a coding downstream 60183 16586187 ~ 16593573 (+)
ect2l NA coding downstream 68543 16594547 ~ 16608457 (+)
LOC103021824 efr3b,LOC107697777,LOC107752767,LOC107592778 coding downstream 161914 16687918 ~ 16713041 (+)
LOC103022442 LOC108433935,LOC100537549,LOC107592775,LOC107752809,LOC105908160 coding downstream 195221 16721225 ~ 16729066 (+)
LOC103031040 fam150b,LOC108425626 coding downstream 234819 16760823 ~ 16767006 (+)
G81062 NA non-coding upstream 50830 16406264 ~ 16474654 (+)
G81061 LOC108433921,LOC107733188 non-coding upstream 120516 16403332 ~ 16404968 (+)
G81048 fut8,LOC108433921 non-coding upstream 129781 16392302 ~ 16395703 (+)
G81018 NA non-coding upstream 252285 16269073 ~ 16273199 (+)
G81017 NA non-coding upstream 257876 16267307 ~ 16267608 (+)
G81074 NA non-coding downstream 42999 16569003 ~ 16662616 (+)
G81103 NA non-coding downstream 89198 16615202 ~ 16616148 (+)
G81105 NA non-coding downstream 91683 16617687 ~ 16618124 (+)
G81106 NA non-coding downstream 93579 16619583 ~ 16621422 (+)
G81124 NA non-coding downstream 152644 16678648 ~ 16681932 (+)
G80857 NA other upstream 942153 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 1321697 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 1690405 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 1722452 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 1726880 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 1501303 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 1934119 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 1985618 18511622 ~ 18520947 (+)
G81704 NA other downstream 2404234 18930238 ~ 18930754 (+)
G81761 NA other downstream 3139732 19665736 ~ 19666047 (+)

Expression


Co-expression Network