G81293


Basic Information

Item Value
gene id G81293
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 17121132 ~ 17121545 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109546
catgaacatcacagagagggacattgcgtctggtagcaacattgggcaggacaatacatgcaagtgttatgttgcatgctCCCTGTGGTTCGACTCGCAAATAGTTAAGGCATGCAAAGCGTCTCTGCAGAACACTCGATTGctcgtattgttttgcaataagcagtatcttgttactgcaagaaaaggagtcatcaacccctgttggttcttctatctgttttttacatagctggtaatccggattaggtaatcctgaaaactgtgtttctggatcaggttgatccaatccaatattgctttgaaaaactggcttaaaagtaagacagatcacctgatcctggatagcaaaaaatgtgattaccaaatctggataattttgatccggattacattttttgaacaactggccca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109546 True 414 lncRNA 0.41 1 17121132 17121545

Neighbor

gene id symbol gene type direction distance location
sh3yl1 sh3yl1,LOC107733179,LOC107594817,LOC107674108 coding upstream 282428 16782537 ~ 16838704 (+)
LOC103031040 fam150b,LOC108425626 coding upstream 354126 16760823 ~ 16767006 (+)
LOC103022442 LOC108433935,LOC100537549,LOC107592775,LOC107752809,LOC105908160 coding upstream 392066 16721225 ~ 16729066 (+)
LOC103021824 efr3b,LOC107697777,LOC107752767,LOC107592778 coding upstream 408091 16687918 ~ 16713041 (+)
ect2l NA coding upstream 512675 16594547 ~ 16608457 (+)
LOC103043735 id2,id2a,LOC107579075,LOC107707685,LOC106566577,LOC107655320 coding downstream 395427 17516972 ~ 17519541 (+)
asap2 asap2,LOC107707693 coding downstream 633008 17754553 ~ 17876082 (+)
iah1 iah1 coding downstream 776412 17897957 ~ 17902838 (+)
eprs eprs,LOC107662594,LOC107679779 coding downstream 1163032 18284577 ~ 18306094 (+)
LOC103038992 NA coding downstream 1186702 18308247 ~ 18315290 (+)
G81291 NA non-coding upstream 394 17120492 ~ 17120738 (+)
G81288 NA non-coding upstream 27147 17093784 ~ 17093985 (+)
G81282 NA non-coding upstream 89773 17031063 ~ 17031359 (+)
G81243 NA non-coding upstream 138203 16979417 ~ 16982929 (+)
G81224 NA non-coding upstream 256590 16864111 ~ 16864542 (+)
G81312 NA non-coding downstream 389153 17510698 ~ 17510913 (+)
G81335 NA non-coding downstream 515159 17636704 ~ 17640481 (+)
G81347 NA non-coding downstream 607421 17728966 ~ 17729447 (+)
G81348 NA non-coding downstream 751220 17872765 ~ 17940581 (+)
G81349 NA non-coding downstream 757485 17879030 ~ 17879762 (+)
G80857 NA other upstream 1537801 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 1917345 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 2286053 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 2318100 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 2322528 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 905762 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 1338578 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 1390077 18511622 ~ 18520947 (+)
G81704 NA other downstream 1808693 18930238 ~ 18930754 (+)
G81761 NA other downstream 2544191 19665736 ~ 19666047 (+)

Expression


Co-expression Network