G81358


Basic Information

Item Value
gene id G81358
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 17892302 ~ 17894351 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109633
tgttgagggaaggtgtaatgtaaaggtgtaatagtgttgagggaaggtgtaatgtaaaggtgtaatagtgttgagggaaggtgtaatgtaaaggtgtaatagtgttgagggaaggtataatattgttaagggaaggtgtaatgtaaaggtgtaatagtgttgagggaaggtataatattgttaagggaaggtgtaatgtaaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109633 True 203 lncRNA 0.36 2 17892302 17894351

Neighbor

gene id symbol gene type direction distance location
asap2 asap2,LOC107707693 coding upstream 16220 17754553 ~ 17876082 (+)
LOC103043735 id2,id2a,LOC107579075,LOC107707685,LOC106566577,LOC107655320 coding upstream 372761 17516972 ~ 17519541 (+)
sh3yl1 sh3yl1,LOC107733179,LOC107594817,LOC107674108 coding upstream 1053598 16782537 ~ 16838704 (+)
LOC103031040 fam150b,LOC108425626 coding upstream 1125296 16760823 ~ 16767006 (+)
LOC103022442 LOC108433935,LOC100537549,LOC107592775,LOC107752809,LOC105908160 coding upstream 1163236 16721225 ~ 16729066 (+)
iah1 iah1 coding downstream 3606 17897957 ~ 17902838 (+)
eprs eprs,LOC107662594,LOC107679779 coding downstream 390226 18284577 ~ 18306094 (+)
LOC103038992 NA coding downstream 413896 18308247 ~ 18315290 (+)
ahsa1 ahsa1,ahsa1b,LOC108425677 coding downstream 440749 18335100 ~ 18342283 (+)
LOC103046791 NA coding downstream 455391 18349742 ~ 18411822 (+)
G81349 NA non-coding upstream 12540 17879030 ~ 17879762 (+)
G81347 NA non-coding upstream 162855 17728966 ~ 17729447 (+)
G81335 NA non-coding upstream 251821 17636704 ~ 17640481 (+)
G81312 NA non-coding upstream 381389 17510698 ~ 17510913 (+)
G81293 NA non-coding upstream 770757 17121132 ~ 17121545 (+)
G81446 NA non-coding downstream 182021 18076372 ~ 18095098 (+)
G81452 NA non-coding downstream 242261 18136612 ~ 18137206 (+)
G81460 NA non-coding downstream 315434 18209785 ~ 18210341 (+)
G81465 NA non-coding downstream 371868 18266219 ~ 18266484 (+)
G81466 NA non-coding downstream 382512 18276863 ~ 18277190 (+)
G80857 NA other upstream 2308971 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 2688515 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 3057223 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 3089270 14788602 ~ 14803032 (+)
LOC103029370 pygb,LOC107553065,LOC107663289,LOC107671137,LOC107717055,LOC107583638 other upstream 3093698 14730508 ~ 14798604 (+)
cmpk2 cmpk2 other downstream 132956 18027307 ~ 18037074 (+)
LOC103035760 rtkn2,rtkn2a other downstream 565772 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 617271 18511622 ~ 18520947 (+)
G81704 NA other downstream 1035887 18930238 ~ 18930754 (+)
G81761 NA other downstream 1771385 19665736 ~ 19666047 (+)

Expression


Co-expression Network