G81452


Basic Information

Item Value
gene id G81452
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 18136612 ~ 18137206 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU109754
gataatactgatctctgaacagtgaataagctagctaatgctatttgctgctccagcctcggagctgcacggctctggactctgtatagcactgaaactctgtataacgctgcacggagtgtgtgtttactgctccttacaacctgacgagtaaaatttagataatactgatctctgaacagtgaataagctagctaatgctatttgctgctccagcctcggagctgcacggctctggactctgtatagcactgaaactctgtataacgctgcacggagtgtgtgtttactgctccttacaacctgacgagtaaaatttagataatactgatctctgaacagtgaataagctagctagcttagcggttagcatctagctaatgctattgctgctccagcctcggagctgcacggctctggactctgtatagcactgaaactctctataacgctgcacggagtgtgtgtttactgctccttacaacctgacgagtaaaatccatacaaaaggcgcaccgtattataagacgcactgtcaatttttgtgaaaattaaaagtttttaagtgcgccttatagtccgaaaaatacggtat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU109754 True 595 lncRNA 0.44 1 18136612 18137206

Neighbor

gene id symbol gene type direction distance location
iah1 iah1 coding upstream 233774 17897957 ~ 17902838 (+)
asap2 asap2,LOC107707693 coding upstream 260530 17754553 ~ 17876082 (+)
LOC103043735 id2,id2a,LOC107579075,LOC107707685,LOC106566577,LOC107655320 coding upstream 617071 17516972 ~ 17519541 (+)
sh3yl1 sh3yl1,LOC107733179,LOC107594817,LOC107674108 coding upstream 1297908 16782537 ~ 16838704 (+)
LOC103031040 fam150b,LOC108425626 coding upstream 1369606 16760823 ~ 16767006 (+)
eprs eprs,LOC107662594,LOC107679779 coding downstream 147371 18284577 ~ 18306094 (+)
LOC103038992 NA coding downstream 171041 18308247 ~ 18315290 (+)
ahsa1 ahsa1,ahsa1b,LOC108425677 coding downstream 197894 18335100 ~ 18342283 (+)
LOC103046791 NA coding downstream 212536 18349742 ~ 18411822 (+)
LOC103032442 LOC108425610 coding downstream 299083 18436289 ~ 18440089 (+)
G81446 NA non-coding upstream 41514 18076372 ~ 18095098 (+)
G81348 NA non-coding upstream 196031 17872765 ~ 17940581 (+)
G81358 NA non-coding upstream 242261 17892302 ~ 17894351 (+)
G81349 NA non-coding upstream 256850 17879030 ~ 17879762 (+)
G81347 NA non-coding upstream 407165 17728966 ~ 17729447 (+)
G81460 NA non-coding downstream 72579 18209785 ~ 18210341 (+)
G81465 NA non-coding downstream 129013 18266219 ~ 18266484 (+)
G81466 NA non-coding downstream 139657 18276863 ~ 18277190 (+)
G81537 LOC108425611 non-coding downstream 303863 18441069 ~ 18442711 (+)
G81539 NA non-coding downstream 310182 18447388 ~ 18500711 (+)
cmpk2 cmpk2 other upstream 99538 18027307 ~ 18037074 (+)
G80857 NA other upstream 2553281 15563987 ~ 15583331 (+)
LOC111193203 NA other upstream 2932825 15174535 ~ 15203787 (+)
LOC111188193 LOC108431664 other upstream 3301533 14806315 ~ 14835079 (+)
LOC111193140 NA other upstream 3333580 14788602 ~ 14803032 (+)
LOC103035760 rtkn2,rtkn2a other downstream 322917 18460123 ~ 18469635 (+)
LOC103033848 LOC108435752 other downstream 374416 18511622 ~ 18520947 (+)
G81704 NA other downstream 793032 18930238 ~ 18930754 (+)
G81761 NA other downstream 1528530 19665736 ~ 19666047 (+)
G81763 NA other downstream 1535921 19673127 ~ 19673638 (+)

Expression


Co-expression Network