G81920


Basic Information

Item Value
gene id G81920
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 20301278 ~ 20301732 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU110415
gaaatgacaggttttgtaaaataaaagtatttattaaatcacacatatatgagtaaataattcattaaaaagtcataaatgtagccattagatatcaaatcatagtgtagaatgataaatgagaaataaacaacaaacacgttataatgctgatatgaaaggaataaagattaatagaactattaagtgaatatttctaaataagggtctaaggcattttaagtctaCGAAACCAGTTCTTATTTCCAACCAAGCAACTCAAAATGAGTCATCTATACTAAAGAAGACTAAATTAAAGACCCGATCCAAACCATGACCAACAGACACCATCTGCCGAAagattaaacccagctctgccttactctgagttgTTGAAGTGGGCCTTGGTGACGTCCGCCTGGGTTGGTCGTCTGATGCTTCACCCCGAAAAAGGATCACGTGAGCCTGTCTGCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110415 True 455 lncRNA 0.36 1 20301278 20301732

Neighbor

gene id symbol gene type direction distance location
elmsan1 elmsan1 coding upstream 54968 20213109 ~ 20246310 (+)
tmem62 tmem62,LOC103132791 coding upstream 101439 20184910 ~ 20199839 (+)
LOC103035446 hadhab,LOC103035446,LOC108425650,LOC100304971,LOC107594700,LOC107752738,LOC107679805,LOC107600864,LOC107741851 coding upstream 126969 20161268 ~ 20174309 (+)
LOC103037509 LOC108425602 coding upstream 146596 20150418 ~ 20154682 (+)
LOC103040036 NA coding upstream 473073 19800197 ~ 19828205 (+)
mta1 mta1,LOC107679789,LOC107666257 coding downstream 89638 20391370 ~ 20446806 (+)
tmem229b tmem229b,LOC107752730,LOC107578043,LOC107708331,LOC107679790,LOC107666241 coding downstream 146178 20447910 ~ 20464852 (+)
LOC103044638 LOC108425659,LOC108270359,LOC107679799,LOC107752725,LOC107666266 coding downstream 412691 20714423 ~ 20771645 (+)
slc25a21 slc25a21,LOC107679800 coding downstream 475706 20777438 ~ 20888798 (+)
LOC103021743 nkx2-8,LOC108421114 coding downstream 613534 20915266 ~ 20917239 (+)
G81919 crip1,LOC103034058,LOC106611282,LOC107600860 non-coding upstream 28555 20261599 ~ 20272723 (+)
G81917 NA non-coding upstream 77610 20222482 ~ 20223668 (+)
G81913 NA non-coding upstream 114125 20185814 ~ 20187153 (+)
G81899 NA non-coding upstream 121748 20149777 ~ 20179530 (+)
G81856 NA non-coding upstream 309549 19990539 ~ 19991729 (+)
G81955 NA non-coding downstream 70382 20372114 ~ 20372392 (+)
G81983 NA non-coding downstream 241979 20543711 ~ 20543911 (+)
G82014 NA non-coding downstream 471024 20772756 ~ 20776477 (+)
G82073 NA non-coding downstream 645864 20947596 ~ 20948442 (+)
G82089 NA non-coding downstream 717360 21019092 ~ 21019862 (+)
G81763 NA other upstream 627640 19673127 ~ 19673638 (+)
G81761 NA other upstream 635231 19665736 ~ 19666047 (+)
G81704 NA other upstream 1370524 18930238 ~ 18930754 (+)
LOC103033848 LOC108435752 other upstream 1780331 18511622 ~ 18520947 (+)
LOC103035760 rtkn2,rtkn2a other upstream 1831643 18460123 ~ 18469635 (+)
ralgapa2 ralgapa2,LOC107687934 other downstream 1219175 21520907 ~ 21673438 (+)
G82488 NA other downstream 2055912 22357644 ~ 22358135 (+)
G82609 baz1a other downstream 2928698 23230430 ~ 23231318 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 3573707 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 3607950 23909682 ~ 23973975 (+)

Expression


Co-expression Network