G82383 (erh,ERH)


Basic Information

Item Value
gene id G82383
gene name erh,ERH
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 22074542 ~ 22079050 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111046
GCAACATAAAAACGAATGCCTAACACCAGTTTCAACAGTCATTTTATTAGAATTCAGCAGAAGGAAAAATATCTGAGACATTTGCTTACAAAGAGGGAAAACGTAATAATTAACAACAACTAACATATAGTAAGTCATCCACAGTTTTCAACTCACTTAAAACAGACCACTGGTTCTCAAGCATAATCCTGGAAACGTCTGTAATGTACACCATTTCTAACACACTCCCCAGAGCAGTGGGTCCAGAAGACCAGAGTCGGTACAACTTGGTGCTTTTCTCTCCTTGAACACAAGTGGCTCTAATTTTCAGAATATTTCTGTTTGGTTTTTATGGGGAagcagggggaaaaaaaaaacaccaaatgcACTCTTCAGGACTAAAACTAGTGGCATTTTCTGTAACCAAACCTTCATATCAGAATCAAGTAGATCTGACTGGGGCTGGCAGATACTGAAAAAGTAGTGGTCATCCAGGACTGCAGAAATATGACTGAGAACCAGTGCTCTAAATCTCTGACCCACAATCCTCACATTTCTCCTTAGCAGACATTTCTTCTTTAGACTGACTGAGGATGAACTTCCCACCATATCCCTGAAATGCAAAGCTTATGTCTGATGGGTACACAAGGGCAACTTGTAGTTTATTTTCCAGCCTGCTGAGCTTGTCGACGTAGCAAAACataaattttctcttttatccaGTCTTTGTTGTTGGGCTGatatgtctgtgtgtctgcACGGTACACCAAGCAGCTGAGATCTGCCAAGTCATCAATGAAATCAAACAGCTGACTAATGTCATATGTGATTGATGGACTGTTGGGGTTCATTCTCTTCAGATGTTCTTCGTACATTTTACACACTCCTTCCATACACTCATTAACCGATTCATAATCGGCGTATGTTCTTCCCTCTGGCCTCTTGGTGGGCTGAACCAGTAGAATAGTATGAGACATGTTTGATGTTTGAGTTGTTGTCAGATCCACAAGTATATAACCGACTTCTCTCCTGGTTTTCCGCAAACAGCGTATCCTGCTCTCCGATTCGTATCGTCACCAGTGGGGATACTCCACTTCCTACCGTCCAGCATTTCAAACCTAAAGTCCCCCAACCATCACATTTAACTTCTCACAAAATCTACTGCAGTTTAAAAGTGGCTTATTGTTGTTATATGAGGAAACATTTATGCTGACATTTATGCTCCACTTGAGTGGTACAAGAATGTAACAGATGCTACAGTTAAT

Function

symbol description
erh Predicted to be located in nucleus. Orthologous to human ERH (ERH mRNA splicing and mitosis factor).

NR:

description
enhancer of rudimentary homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111046 True 1244 lncRNA 0.41 4 22074542 22079050

Neighbor

gene id symbol gene type direction distance location
exd2 exd2 coding upstream 19131 22047614 ~ 22055411 (+)
numb numb coding upstream 28112 22000613 ~ 22046430 (+)
galnt16 galnt16,LOC107707671 coding upstream 79595 21956008 ~ 21994947 (+)
vps39 vps39 coding upstream 126351 21927566 ~ 21948191 (+)
tmem87a tmem87a coding upstream 148169 21914226 ~ 21926373 (+)
ubr1 ubr1 coding downstream 2637 22081687 ~ 22103651 (+)
LOC103041179 NA coding downstream 32064 22111114 ~ 22128141 (+)
tmem179 tmem179,LOC107679825,LOC107569011,LOC107732500,LOC107602274,LOC100537383 coding downstream 51896 22130946 ~ 22135297 (+)
LOC103037751 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 coding downstream 512519 22591569 ~ 22594357 (+)
edrf1 edrf1,LOC107729289 coding downstream 548254 22627304 ~ 22637793 (+)
G82336 tmem30a,LOC107581488,LOC107714749,LOC107571817,LOC104951461,LOC107687843,LOC107721815 non-coding upstream 193540 21880537 ~ 21881002 (+)
G82349 LOC108428626,LOC106610771,LOC105015763,LOC107687947 non-coding upstream 195801 21878055 ~ 21878741 (+)
G82345 NA non-coding upstream 204648 21868379 ~ 21869894 (+)
G82311 NA non-coding upstream 285602 21787174 ~ 21788940 (+)
G82270 NA non-coding upstream 353164 21720629 ~ 21721378 (+)
G82438 NA non-coding downstream 59446 22138496 ~ 22141716 (+)
G82465 NA non-coding downstream 155453 22234503 ~ 22234891 (+)
G82476 NA non-coding downstream 206013 22285063 ~ 22285341 (+)
G82487 NA non-coding downstream 276591 22355641 ~ 22356086 (+)
G82493 NA non-coding downstream 287190 22366240 ~ 22368956 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 401104 21520907 ~ 21673438 (+)
G81763 NA other upstream 2400904 19673127 ~ 19673638 (+)
G81761 NA other upstream 2408495 19665736 ~ 19666047 (+)
G81704 NA other upstream 3143788 18930238 ~ 18930754 (+)
LOC103033848 LOC108435752 other upstream 3553595 18511622 ~ 18520947 (+)
G82488 NA other downstream 278594 22357644 ~ 22358135 (+)
G82609 baz1a other downstream 1151380 23230430 ~ 23231318 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 1796389 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 1830632 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 2060339 24139389 ~ 24142232 (+)

Expression


Co-expression Network