G82465


Basic Information

Item Value
gene id G82465
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 22234503 ~ 22234891 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111156
ctgcaatgccctgctaactggcctcccggcctgtgtagtaaaaccactccagatgatccagaacgcagcagcacgtctggtcttcaaccagccaaaacgggcacatgtcaccccgctgctcattgagctccattggctaccagttgatgctcgcatcaaattcaaagctcttacaatcgcctacaaggtgatgacagaacagctccttcctacctgcactcgctcctgaaggcttacgctacctcccggccgctgcgctcctccaatgaacgtcgcctcgctttgccaaacaaacactcacacaaagcaatccagactgttctcatacagagttccccaatggtggaacaaactaccttccactaccagatcaggagaatctctcgcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111156 True 389 lncRNA 0.53 1 22234503 22234891

Neighbor

gene id symbol gene type direction distance location
tmem179 tmem179,LOC107679825,LOC107569011,LOC107732500,LOC107602274,LOC100537383 coding upstream 99206 22130946 ~ 22135297 (+)
LOC103041179 NA coding upstream 106362 22111114 ~ 22128141 (+)
ubr1 ubr1 coding upstream 130852 22081687 ~ 22103651 (+)
exd2 exd2 coding upstream 179092 22047614 ~ 22055411 (+)
numb numb coding upstream 188073 22000613 ~ 22046430 (+)
LOC103037751 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 coding downstream 356678 22591569 ~ 22594357 (+)
edrf1 edrf1,LOC107729289 coding downstream 392413 22627304 ~ 22637793 (+)
tonsl tonsl coding downstream 403842 22638733 ~ 22663127 (+)
LOC103036290 psmc1,LOC108443803 coding downstream 451840 22686731 ~ 22692160 (+)
akap6 akap6 coding downstream 476191 22711082 ~ 22844378 (+)
G82438 NA non-coding upstream 92787 22138496 ~ 22141716 (+)
G82383 erh,ERH non-coding upstream 155453 22074542 ~ 22079050 (+)
G82336 tmem30a,LOC107581488,LOC107714749,LOC107571817,LOC104951461,LOC107687843,LOC107721815 non-coding upstream 353501 21880537 ~ 21881002 (+)
G82349 LOC108428626,LOC106610771,LOC105015763,LOC107687947 non-coding upstream 355762 21878055 ~ 21878741 (+)
G82345 NA non-coding upstream 364609 21868379 ~ 21869894 (+)
G82476 NA non-coding downstream 50172 22285063 ~ 22285341 (+)
G82487 NA non-coding downstream 120750 22355641 ~ 22356086 (+)
G82493 NA non-coding downstream 131349 22366240 ~ 22368956 (+)
LOC111193141 NA non-coding downstream 159104 22393995 ~ 22409035 (+)
G82515 NA non-coding downstream 314974 22549865 ~ 22551789 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 561065 21520907 ~ 21673438 (+)
G81763 NA other upstream 2560865 19673127 ~ 19673638 (+)
G81761 NA other upstream 2568456 19665736 ~ 19666047 (+)
G81704 NA other upstream 3303749 18930238 ~ 18930754 (+)
LOC103033848 LOC108435752 other upstream 3713556 18511622 ~ 18520947 (+)
G82488 NA other downstream 122753 22357644 ~ 22358135 (+)
G82609 baz1a other downstream 995539 23230430 ~ 23231318 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 1640548 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 1674791 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 1904498 24139389 ~ 24142232 (+)

Expression


Co-expression Network