G82493


Basic Information

Item Value
gene id G82493
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 22366240 ~ 22368956 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111186
aaaacataaatcaaacagAAACTCAGAAACATGAGACTAACTAACAGGCAGGATTaaacacagccgtgacagacgtatacacgcacaagaaccgacaaaaacactaatgacagagacgcttaaatacacacacaaggcgggaaagagaacaggtaacacctggggactgactaatgaggggcggagctacaaatggacacaggtgagtggaaaaacactggcagaacacaggggcacgggtaacgtgggacaacacaggcacgaggacagacaggaaacagggccaggcgtgacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111186 True 296 lncRNA 0.48 2 22366240 22368956

Neighbor

gene id symbol gene type direction distance location
tmem179 tmem179,LOC107679825,LOC107569011,LOC107732500,LOC107602274,LOC100537383 coding upstream 230943 22130946 ~ 22135297 (+)
LOC103041179 NA coding upstream 238099 22111114 ~ 22128141 (+)
ubr1 ubr1 coding upstream 262589 22081687 ~ 22103651 (+)
exd2 exd2 coding upstream 310829 22047614 ~ 22055411 (+)
numb numb coding upstream 319810 22000613 ~ 22046430 (+)
LOC103037751 arf6,arf6a,arf6.2,ARF6,LOC105893149,LOC106608083 coding downstream 222613 22591569 ~ 22594357 (+)
edrf1 edrf1,LOC107729289 coding downstream 258348 22627304 ~ 22637793 (+)
tonsl tonsl coding downstream 269777 22638733 ~ 22663127 (+)
LOC103036290 psmc1,LOC108443803 coding downstream 317775 22686731 ~ 22692160 (+)
akap6 akap6 coding downstream 342126 22711082 ~ 22844378 (+)
G82487 NA non-coding upstream 10154 22355641 ~ 22356086 (+)
G82476 NA non-coding upstream 80899 22285063 ~ 22285341 (+)
G82465 NA non-coding upstream 131349 22234503 ~ 22234891 (+)
G82438 NA non-coding upstream 224524 22138496 ~ 22141716 (+)
G82383 erh,ERH non-coding upstream 287190 22074542 ~ 22079050 (+)
LOC111193141 NA non-coding downstream 25039 22393995 ~ 22409035 (+)
G82515 NA non-coding downstream 180909 22549865 ~ 22551789 (+)
G82579 eapp,LOC107733856,LOC107729290 non-coding downstream 758997 23127953 ~ 23194290 (+)
G82583 NA non-coding downstream 795057 23164013 ~ 23165063 (+)
G82588 NA non-coding downstream 835859 23204815 ~ 23205444 (+)
G82488 NA other upstream 8105 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 692802 21520907 ~ 21673438 (+)
G81763 NA other upstream 2692602 19673127 ~ 19673638 (+)
G81761 NA other upstream 2700193 19665736 ~ 19666047 (+)
G81704 NA other upstream 3435486 18930238 ~ 18930754 (+)
G82609 baz1a other downstream 861474 23230430 ~ 23231318 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 1506483 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 1540726 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 1770433 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 2526938 24895894 ~ 24924815 (+)

Expression


Co-expression Network