G82609 (baz1a)


Basic Information

Item Value
gene id G82609
gene name baz1a
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23230430 ~ 23231318 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111323
CTGAGCCTGGAAAATGGCAGACAGGAAAAAGAAGAGCAGCTCGCACAACGGCCCCTCCGGATCACAGCCCATCAGAGCCTCTTCCAGAACCTCTAGTGTGATCCCATCAGGAAACTCATCTTTTAGGTCAAAGAGCTCTCCAAATGCTTTCAGAAATTCTAGCACCATCAGGGCATCTCCGAACAGCTCTGGAGGCAGACGGGTCTTCACTGGCACCGGCTTTGGTagctcCTTTAGATCATCACACTCCATGTCCTCTCGAGGTTTATTCCACAGCTTTAGTCGTTCAGCatatttcttcttctcctccttcagcTTTTCCCGTTCcctctctttctccatcttcaTGCGTTCcttctcttcccttctcttctGTTTTTCCTCCTCAACCATTTTCTTGagttcttcttttcttctgtctctgtcttccttttctttctttttggctTCCAACAAATCATCTCTTTCTCGCTTTAATTTAGATTTCTCAC

Function

symbol description
baz1a Predicted to enable metal ion binding activity. Predicted to be located in nucleus. Orthologous to human BAZ1A (bromodomain adjacent to zinc finger domain 1A).

NR:

description
PREDICTED: bromodomain adjacent to zinc finger domain protein 1A isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111323 True 491 TUCP 0.46 4 23230430 23231318

Neighbor

gene id symbol gene type direction distance location
npas3 npas3 coding upstream 75845 22857844 ~ 23154585 (+)
akap6 akap6 coding upstream 386052 22711082 ~ 22844378 (+)
LOC103036290 psmc1,LOC108443803 coding upstream 538270 22686731 ~ 22692160 (+)
tonsl tonsl coding upstream 567303 22638733 ~ 22663127 (+)
edrf1 edrf1,LOC107729289 coding upstream 592637 22627304 ~ 22637793 (+)
srp54 srp54,LOC107729255,LOC107693187,LOC107733904 coding downstream 10853 23242171 ~ 23248849 (+)
sec23a sec23a,LOC107689296,LOC107589610 coding downstream 19342 23250660 ~ 23267862 (+)
clec14a NA coding downstream 77727 23309045 ~ 23312366 (+)
foxa1 foxa1,LOC106611236 coding downstream 134113 23365431 ~ 23368635 (+)
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding downstream 222683 23454001 ~ 23473086 (+)
G82606 NA non-coding upstream 3520 23225765 ~ 23226910 (+)
G82596 NA non-coding upstream 21631 23208495 ~ 23208799 (+)
G82588 NA non-coding upstream 24986 23204815 ~ 23205444 (+)
G82579 eapp,LOC107733856,LOC107729290 non-coding upstream 36140 23127953 ~ 23194290 (+)
G82583 NA non-coding upstream 65367 23164013 ~ 23165063 (+)
G82748 NA non-coding downstream 241886 23473204 ~ 23473455 (+)
G82754 NA non-coding downstream 267401 23498719 ~ 23499013 (+)
G82753 NA non-coding downstream 267718 23499036 ~ 23552919 (+)
G82763 NA non-coding downstream 349830 23581148 ~ 23581751 (+)
G82766 NA non-coding downstream 359182 23590500 ~ 23590893 (+)
G82488 NA other upstream 872295 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 1556992 21520907 ~ 21673438 (+)
G81763 NA other upstream 3556792 19673127 ~ 19673638 (+)
G81761 NA other upstream 3564383 19665736 ~ 19666047 (+)
G81704 NA other upstream 4299676 18930238 ~ 18930754 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 644121 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 678364 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 908071 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 1664576 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1702846 24934164 ~ 24936186 (+)

Expression


Co-expression Network