G82748


Basic Information

Item Value
gene id G82748
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23473204 ~ 23473455 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111497
TATAGCTTAAGCATCACCATCACAATACATACATGTCTAATACTCACACCACAGGACATGAAACGTTACACAAGGCAAATTAAATGTCATTCTACATCTTGCCTGATGCAAATCAATAACACCAATTGTTCTCCTTTTTTCATGATATATGTACAAGATTCTAGTTGTCCATTATCATTTTATTCCAGTCTGCATTTCAAAGAGTGCATTAATAATTTCATAACAGGTTGGATCACTGACTTTGGAAGAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111497 True 252 lncRNA 0.33 1 23473204 23473455

Neighbor

gene id symbol gene type direction distance location
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding upstream 118 23454001 ~ 23473086 (+)
foxa1 foxa1,LOC106611236 coding upstream 104569 23365431 ~ 23368635 (+)
clec14a NA coding upstream 160838 23309045 ~ 23312366 (+)
sec23a sec23a,LOC107689296,LOC107589610 coding upstream 205342 23250660 ~ 23267862 (+)
srp54 srp54,LOC107729255,LOC107693187,LOC107733904 coding upstream 224355 23242171 ~ 23248849 (+)
LOC103028567 NA coding downstream 1804 23475259 ~ 23498557 (+)
LOC103030470 mapkbp1 coding downstream 32201 23505656 ~ 23549535 (+)
LOC103031726 tbpl2,LOC107729258,LOC107586674,LOC107693101 coding downstream 85597 23559052 ~ 23563050 (+)
atg14 atg14,zgc:113944,LOC106602264,LOC106611244 coding downstream 90671 23564126 ~ 23570689 (+)
LOC103037620 ctbp2a,LOC103037620,LOC108428680,LOC107692786,LOC107589601,LOC107729277,LOC107665110 coding downstream 466455 23939910 ~ 24009312 (+)
G82606 NA non-coding upstream 246294 23225765 ~ 23226910 (+)
G82596 NA non-coding upstream 264405 23208495 ~ 23208799 (+)
G82588 NA non-coding upstream 267760 23204815 ~ 23205444 (+)
G82579 eapp,LOC107733856,LOC107729290 non-coding upstream 278914 23127953 ~ 23194290 (+)
G82583 NA non-coding upstream 308141 23164013 ~ 23165063 (+)
G82754 NA non-coding downstream 25264 23498719 ~ 23499013 (+)
G82753 NA non-coding downstream 25581 23499036 ~ 23552919 (+)
G82763 NA non-coding downstream 107693 23581148 ~ 23581751 (+)
G82766 NA non-coding downstream 117045 23590500 ~ 23590893 (+)
G82768 NA non-coding downstream 122757 23596212 ~ 23596474 (+)
G82609 baz1a other upstream 241886 23230430 ~ 23231318 (+)
G82488 NA other upstream 1115069 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 1799766 21520907 ~ 21673438 (+)
G81763 NA other upstream 3799566 19673127 ~ 19673638 (+)
G81761 NA other upstream 3807157 19665736 ~ 19666047 (+)
timm9 timm9,LOC107729247,LOC107693171,LOC107689314 other downstream 401984 23875439 ~ 23877770 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 436227 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 665934 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 1422439 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1460709 24934164 ~ 24936186 (+)

Expression


Co-expression Network