timm9 (timm9,LOC107729247,LOC107693171,LOC107689314)


Basic Information

Item Value
gene id timm9
gene name timm9,LOC107729247,LOC107693171,LOC107689314
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035905.1
NCBI id CM008308.1
chromosome length 42966623
location 23875439 ~ 23877770 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU111569
aaatatatcaaaatatttaaaagcaattttacattttaatatttatcaaTCATCGtgaagaaatgaatgaatttgcCTTGTTGCAGCGAAAGTGCCGCAGTGAAGCGCCGGTTGTTCTTTCTCTTGTCCACAGCGTCACATGTCCTTCAGAGAGGGTCCGCAGGCTCGAGCTTCCAGGTGCAGACTGAGAGTCCACTCTTTAAACTATGGCTGCCCAAGTTACAGAATCAGACCAGATCAAACAGTTCAAGGAATTTCTGGGCACCTACAACAAGCTGACAGAGAACTGCTTCATGGATTGTGTTAAAGATTTCACTACTAGAGAAGTGAAAGCAGAAGAGACCTCGTGCTCTGAGAGCTGTCTACAGAAGTATCTAAAAATGACCCAGCGGATCTCCATGCGCTTCCAGGAGTATCACATCCAACAGAACGAGGCTCTGGCAGCCAAAGCTGGTTTACTAGGCCAGCCACGGTAGTCTATTGCTGTGTTTTCTTACGGACTCTGATATCCTCAGGCTGTAATTCTCACCATGCCTATTAGGAGGCTGAATCTCCATATTGGAACAACATGGCTACGCACACTGTCAAGGTTCTCTGTTTGGTTCAGCTCCTCAGCACTGGTAGGACCTTTTGTTTCCCAAGATTCTCCCGGAGGAAGAGGCTCGATAGACTTGGTCTATGGCTTGGGCAAAATGTGAagatagtgtttttttgtttgtttgtttttaaatgtaaatcttTGCATCTAACAAGAATAAAAAAGCAGCAAGATAACTTCT
>TU111570
aaatatatcaaaatatttaaaagcaattttacattttaatatttatcaaTCATCGtgaagaaatgaatgaatttgcCTTGTTGCAGCGAAAGTGCCGCAGTGAAGCGCCGGTTGTTCTTTCTCTTGTCCACAGCGTCACATGTCCTTCAGAGAGGGTCCGCAGGCTCGAGCTTCCAGGTGCAGACTGAGGTAATGTAGCGACGGGTTTTCGCTCTGTACCGTTTACACTATTAAATTACAAACATTATGATACAGAGCAGcgtaatttatttgtatagggTCTGTGGGCttccgctgctgctgctgctgctgctgctaaccagcTAAAGAAATAAGAGTCCACTCTTTAAACTATGGCTGCCCAAGTTACAGAATCAGACCAGATCAAACAGTTCAAGGAATTTCTGGGCACCTACAACAAGCTGACAGAGAACTGCTTCATGGATTGTGTTAAAGATTTCACTACTAGAGAAGTGAAAGCAGAAGAGACCTCGTGCTCTGAGAGCTGTCTACAGAAGTATCTAAAAATGACCCAGCGGATCTCCATGCGCTTCCAGGAGTATCACATCCAACAGAACGAGGCTCTGGCAGCCAAAGCTGGTTTACTAGGCCAGCCACGGTAGTCTATTGCTGTGTTTTCTTACGGACTCTGATATCCTCAGGCTGTAATTCTCACCATGCCTATTAGGAGGCTGAATCTCCATATTGGAACAACATGGCTACGCACACTGTCAAGGTTCTCTGTTTGGTTCAGCTCCTCAGCACTGGTAGGACCTTTTGTTTCCCAAGATTCTCCCGGAGGAAGAGGCTCGATAGACTTGGTCTATGGCTTGGGCAAAATGTGAagatagtgtttttttgtttgtttgtttttaaatgtaaatcttTGCATCTAACAAGAATAAAAAAGCAGCAAGATAACTTCT
>XM_007251917.3
CGCAGTGAAGCGCCGGTTGTTCTTTCTCTTGTCCACAGCGTCACATGTCCTTCAGAGAGGGTCCGCAGGCTCGAGCTTCCAGGTGCAGACTGAGAGTCCACTCTTTAAACTATGGCTGCCCAAGTTACAGAATCAGACCAGATCAAACAGTTCAAGGAATTTCTGGGCACCTACAACAAGCTGACAGAGAACTGCTTCATGGATTGTGTTAAAGATTTCACTACTAGAGAAGTGAAAGCAGAAGAGACCTCGTGCTCTGAGAGCTGTCTACAGAAGTATCTAAAAATGACCCAGCGGATCTCCATGCGCTTCCAGGAGTATCACATCCAACAGAACGAGGCTCTGGCAGCCAAAGCTGGTTTACTAGGCCAGCCACGGTAGTCTATTGCTGTGTTTTCTTACGGACTCTGATATCCTCAGGCTGTAATTCTCACCATGCCTATTAGGAGGCTGAATCTCCATATTGGAACAACATGGCTACGCACACTGTCAAGGTTCTCTGTTTGGTTCAGCTCCTCAGCACTGGTAGGACCTTTTGTTTCCCAAGATTCTCCCGGAGGAAGAGGCTCGATAGACTTGGTCTATGGCTTGGGCAAAATGTGAagatagtgtttttttgtttgtttgtttttaaatgtaaatcttTGCATCTAACAAGAATAAAAAAGCAGCAAGATAACTTCTTTA
>XM_022672974.1
GTGGGCttccgctgctgctgctgctgctgctgctaaccagcTAAAGAAATAAGAGTCCACTCTTTAAACTATGGCTGCCCAAGTTACAGAATCAGACCAGATCAAACAGTTCAAGGAATTTCTGGGCACCTACAACAAGCTGACAGAGAACTGCTTCATGGATTGTGTTAAAGATTTCACTACTAGAGAAGTGAAAGCAGAAGAGACCTCGTGCTCTGAGAGCTGTCTACAGAAGTATCTAAAAATGACCCAGCGGATCTCCATGCGCTTCCAGGAGTATCACATCCAACAGAACGAGGCTCTGGCAGCCAAAGCTGGTTTACTAGGCCAGCCACGGTAGTCTATTGCTGTGTTTTCTTACGGACTCTGATATCCTCAGGCTGTAATTCTCACCATGCCTATTAGGAGGCTGAATCTCCATATTGGAACAACATGGCTACGCACACTGTCAAGGTTCTCTGTTTGGTTCAGCTCCTCAGCACTGGTAGGACCTTTTGTTTCCCAAGATTCTCCCGGAGGAAGAGGCTCGATAGACTTGGTCTATGGCTTGGGCAAAATGTGAagatagtgtttttttgtttgtttgtttttaaatgtaaatcttTGCATCTAACAAGAATAAAAAAGCAGCAAGATAACTTCTTTA

Function

symbol description
timm9 Predicted to enable metal ion binding activity. Predicted to act upstream of or within protein transport. Predicted to be located in mitochondrial inner membrane. Orthologous to human TIMM9 (translocase of inner mitochondrial membrane 9).

NR:

description
mitochondrial import inner membrane translocase subunit Tim9

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111569 False 779 TUCP 0.43 4 23875439 23877767
TU111570 True 926 TUCP 0.43 4 23875439 23877767
XM_007251917.3 False 687 mRNA 0.46 4 23875534 23877770
XM_022672974.1 False 646 mRNA 0.44 4 23875722 23877770

Neighbor

gene id symbol gene type direction distance location
atg14 atg14,zgc:113944,LOC106602264,LOC106611244 coding upstream 304750 23564126 ~ 23570689 (+)
LOC103031726 tbpl2,LOC107729258,LOC107586674,LOC107693101 coding upstream 312389 23559052 ~ 23563050 (+)
LOC103030470 mapkbp1 coding upstream 325904 23505656 ~ 23549535 (+)
LOC103028567 NA coding upstream 376882 23475259 ~ 23498557 (+)
tyro3 tyro3,LOC107693181,LOC107729301,LOC107586589,LOC107689305,LOC107589665 coding upstream 402353 23454001 ~ 23473086 (+)
LOC103037620 ctbp2a,LOC103037620,LOC108428680,LOC107692786,LOC107589601,LOC107729277,LOC107665110 coding downstream 62140 23939910 ~ 24009312 (+)
LOC103037301 LOC108428614,LOC108269476 coding downstream 134783 24012553 ~ 24019511 (+)
fzd3 LOC108428681,LOC107729283,LOC108270052,LOC107665105,LOC107589599 coding downstream 145772 24023542 ~ 24046622 (+)
LOC103044752 LOC108428615 coding downstream 227442 24105212 ~ 24110198 (+)
ahi1 ahi1 coding downstream 235366 24113136 ~ 24125115 (+)
G82785 kiaa0586 non-coding upstream 103322 23769525 ~ 23772117 (+)
G82768 NA non-coding upstream 278965 23596212 ~ 23596474 (+)
G82766 NA non-coding upstream 284546 23590500 ~ 23590893 (+)
G82763 NA non-coding upstream 293688 23581148 ~ 23581751 (+)
G82753 NA non-coding upstream 322520 23499036 ~ 23552919 (+)
G82813 NA non-coding downstream 27090 23904860 ~ 23905395 (+)
G82814 NA non-coding downstream 30568 23908338 ~ 23908608 (+)
G82816 NA non-coding downstream 35359 23913129 ~ 23915459 (+)
G82838 NA non-coding downstream 258806 24136576 ~ 24138904 (+)
G83064 NA non-coding downstream 436945 24314715 ~ 24314965 (+)
G82609 baz1a other upstream 644121 23230430 ~ 23231318 (+)
G82488 NA other upstream 1517304 22357644 ~ 22358135 (+)
ralgapa2 ralgapa2,LOC107687934 other upstream 2202001 21520907 ~ 21673438 (+)
G81763 NA other upstream 4201801 19673127 ~ 19673638 (+)
G81761 NA other upstream 4209392 19665736 ~ 19666047 (+)
G82811 psma3,LOC107729246,LOC107725600 other downstream 31912 23909682 ~ 23973975 (+)
G82853 tulp4,LOC108428686,LOC107589648,LOC107734174,LOC107692724,LOC107742753,LOC107653590 other downstream 261619 24139389 ~ 24142232 (+)
ephx2 ephx2,LOC107733988,LOC107692411,LOC107653762 other downstream 1018124 24895894 ~ 24924815 (+)
LOC111193228 NA other downstream 1056394 24934164 ~ 24936186 (+)
c9h8orf74 NA other downstream 1152227 25029997 ~ 25034121 (+)

Expression


Co-expression Network